Protein: | HLHm5-PA |
Organism: | Drosophila melanogaster |
Length: | 178 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HLHm5-PA.
Description | E-value | Query Range |
Subject Range |
|
134.0 | [0..2] | [167..17] |
|
133.0 | [0..1] | [178..1] |
|
133.0 | [0..2] | [173..81] |
|
130.0 | [0..2] | [174..17] |
|
130.0 | [0..1] | [178..1] |
|
128.0 | [0..2] | [168..17] |
Region A: Residues: [1-81] |
1 11 21 31 41 51 | | | | | | 1 MAPQSNNSTT FVSKTQHYLK VKKPLLERQR RARMNKCLDT LKTLVAEFQG DDAILRMDKA 60 61 EMLEAALVFM RKQVVKQQAP V |
Detection Method: | |
Confidence: | 13.522879 |
Match: | 1am9A |
Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
Region A: Residues: [82-178] |
1 11 21 31 41 51 | | | | | | 1 SPLPMDSFKN GYMNAVSEIS RVMACTPAMS VDVGKTVMTH LGVEFQRMLQ ADQVQTSVTT 60 61 STPRPLSPAS SGYHSDNEDS QSAASPKPVE ETMWRPW |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.