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View Structure Prediction Details

Protein: ana1-PB
Organism: Drosophila melanogaster
Length: 1089 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ana1-PB.

Description E-value Query
Range
Subject
Range
MYH4_PIG - Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
338.0 [0..1] [892..1029]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDAMEEMLL RPAIITCPEV RTKPTPPNLS RSKSKASVAV NLGEPPVQIG RDNLGSSESC  60
   61 SSILLDYVND QSKQLKSDLQ AEQSNSLKSM RLKSLLERIE KIRVQLLEEL KAGESGASKG 120
  121 DNAQELNNIR QERADILSER TRTLNERESD LQQKEAILEQ RLRKFYKETK NAKSSESDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2fxmA
Description: No description for 2fxmA was found.

Predicted Domain #2
Region A:
Residues: [180-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKSNAKEDGP VEIIIKVRSD GTVKQYVPRT KSKAKTKPSA IDNEKDVPLG STDSTPRDDE  60
   61 PKPTEQDHGK RPFLQDQRQI SIDSNSTAYR SLPPVSYKNM TTAAPPSAPL HPMVVQYINR 120
  121 LLGMTRQNID EMGVSSSCVT TPSTSVINSL RNVTPCPEPE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-685]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGRAERDQDE NTEMNEHRME RVQTFIADNR SLINDLEESI RCQQQLQREQ QSLDAEKSMR  60
   61 AFDQIWNKRL AKNPEDCQQT NKEKEQTREK MPRERPTPQG DRKNAAPPQE SGKIRRTQEG 120
  121 DRQQQTNGAV QQKREQKTVK QGSGADKSTN RFAPEKSKAL STSEESSARN MERYAQLTEN 180
  181 CTQRIAELTE LITKVREEKQ RLVEVTLTSN SDGERQSTEY LELPTGQQQT RCRTISDRSD 240
  241 SQTPSTSEAL PLQKHKPTAA SRDSGIADSR PITAQGQVCI DVEPISLGSS TQNNTARGRV 300
  301 RAPPATIRRY SPQLNAEDLA HELSTITEVE TPGQSHIVAA TPVPKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [686-885]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPSFDQYAKE LHLDLSRLDA DQSQRLQGEF NDLILAIRQR NQGTDYREFP SINAYLHNMT  60
   61 STRIHVEIGQ DADQATLSPG ELMRQLRVIT HSIQDFPKRR EYFEKLMAKQ PPDQRDLIDS 120
  121 ASLENDSTDS FNVEEELRQR KILKNSFRRG NATETTLTAQ EVASSTRRES VAPVTNDQPN 180
  181 ESGIDPLSGS NFSSDADQRS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #5
Region A:
Residues: [886-1089]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCWHATMHER QQQVDELCSS TTASSPERRP RKSRLRGGHE HNNRSKDDST VQDASQIGRS  60
   61 LNLREFLTRE LLKHRVHDDV ASESSDESLR GHFLKSVLHS LSPSNNTQTP GVGVSHATGA 120
  121 TNDRQKTSTP VGSFLSIPEK AGSMSNTGSQ LFSGESRISL VNYPDGTPPI PFEQQSKLST 180
  181 NQTRQSSGQI GSGVRTTHRK SPRK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle