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View Structure Prediction Details

Protein: CG6178-PA
Organism: Drosophila melanogaster
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6178-PA.

Description E-value Query
Range
Subject
Range
gi|77996178, gi|... - gi|78044063|ref|YP_360551.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus hydrogenoformans Z-...
562.0 [0..4] [543..6]

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Predicted Domain #1
Region A:
Residues: [1-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKLLPGNI VYGGPVTERQ AQDSRSLGQY ILDKYKSFGD RTVLVDAVNG VEYSASFMHK  60
   61 SIVRLAYILQ KLGVKQNDVV GLSSENSVNF ALAMFAGLAV GATVAPLNVT YSDREVDHAI 120
  121 NLSKPKIIFA SKITIDRVAK VASKNKFVKG IIALSGTSKK FKNIYDLKEL MEDEKFKTQP 180
  181 DFTSPAANKD EDVSLIVCSS GTTGLPKGVQ LTQMNLLATL DSQIQPTVIP MEEVTLLTVI 240
  241 PWFHAFGCLT LITTACVGAR LVYLPKFEEK LFLSAIEKYR VMMAFMVPPL MVFLAKHPIV 300
  301 DKYDLSSLMV LLCGAAPLSR ETEDQIKERI GVPFIRQGYG LSESTLSVLV QNDEFCKPGS 360
  361 VGVLKVGIYA KVIDPDTGKL LGANERGELC FKGDGIMKGY IGDTKSTQTA IKDGWLHTGD 420
  421 IGYYDDDFEF FIVDRIKELI KYKGYQVPPA EIEALLLTND KIKDAAVIGK PDEEAGELPL 480
  481 AFVVKQANVQ LTENEVIQFV NDNASPAKRL RGGVIFVDEI PKNPSGKILR RILREMLKKQ 540
  541 KSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1ba3A
Description: FIREFLY LUCIFERASE IN COMPLEX WITH BROMOFORM
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle