YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0311988, sec...
Organism: Drosophila melanogaster
Length: 356 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311988, sec....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
378.0 [0..3] [355..1204]

Back

Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLLQEIDT EHEDMVHHAA LDFYGLLLAT CSSDGSVRIF HSRKNNKALA ELKGHQGPVW  60
   61 QVAWAHPKFG NILASCSYDR KVIVWKSTTP RDWTKLYEYS NHDSSVNSVD FAPSEYGLVL 120
  121 ACASSDGSVS VLTCNTEYGV WDAKKIPNAH TIGVNAISWC PAQAPDPAFD QRVTSRSAAV 180
  181 KRLVSGGCDN LVKIWREDND RWVEEHRLEA HSDWVRDVAW APSIGLPRSQ IATASQDRHV 240
  241 IVWSSNADLS EWTSTVLHTF DDAVWSISWS TTGNILAVTG GDNNVTLWKE NTEGQWIRIN 300
  301 YESGTAIQSK QPSHLPHSHS QQQQALQQHQ QQAPSHPGPS SDSEHSSNLS NSQLSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.39794
Match: 2pm7B
Description: No description for 2pm7B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle