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View Structure Prediction Details

Protein: FBpp0297442, FBp...
Organism: Drosophila melanogaster
Length: 559 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0297442, FBp....

Description E-value Query
Range
Subject
Range
gi|114639026 - gi|114639026|ref|XP_508613.2| PREDICTED: cortactin isoform 3 [Pan troglodytes]
507.0 [0..1] [554..1]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKASAGHQI QATSAASAED DDWETDPDFV NDVSEQEQRW GSKTIDGSGR TAGTIDMDKL  60
   61 REETEQADLD KKKQLLKDQN AGYGYGGKFG VEKDRMDKSA VGHDYQGKVG KHASQKDYSD 120
  121 GFGGKFGVQE DRKDKSAVGW DHVEKVEKHA SQKDYATGFG GKFGVQSDRV DKSAVGWDHI 180
  181 EKVEKHESQK DYSKGFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKFGVQEDRK DKSAVGWDHK EAPQKHASQV DHKVKPVIEG AKPSNLRAKF ENLAKNSEEE  60
   61 SRKRAEEQKR LREAKDKRDR EEAAKKTVAE NTPRTSTEAP PPKGSRAAIQ TGRTGGIGNA 120
  121 ISAFNQMQSP VSETPPARKE PIIIPKAQPV KIELEAKEEP TASTTSAAVA PTPTVVPARE 180
  181 PETAPVAKAA APP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [391-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDVVPQIEVE TVDTPPRSEP QSPVYVPTPQ PEVHAQVQVQ PEPQPQADPE PVVEEEPLYQ  60
   61 NQAEIKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [458-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASPLPPTNGT VSEAVAPSGT ATVPEEAIYA NSDNLADYLE DTGIHAIALY DYQAADDDEI  60
   61 SFDPDDVITH IEKIDDGWWR GLCKNRYGLF PANYVQVVGQ NS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.39794
Match: 1x69A
Description: Solution structures of the SH3 domain of human Src substrate cortactin
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle