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View Structure Prediction Details

Protein: Ir93a-PB
Organism: Drosophila melanogaster
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ir93a-PB.

Description E-value Query
Range
Subject
Range
GRIA4_MOUSE - Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
423.0 [0..1] [523..305]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLFLLFYS YVDQEFLKTN AKCSSCARWR VETAITWGKS QENRKFRSTP QRDAKNRNFE  60
   61 FINIGYWTPV LGFVCQELAF PHIEHHF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNITMDILTV HNPPWQILTK NSNGVIVEHK GIVMEIVKEL SRALNFSYYL HEASAWKEED  60
   61 SLSTSAGGNE SDELVGSMTF R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.09691
Match: 2v3tA
Description: No description for 2v3tA was found.

Predicted Domain #3
Region A:
Residues: [169-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPYRVVEMVQ GNQFFIAAVA ATVEDPDQKP FNYTQPISVQ KYSFITRKPD EVSRIYLFTA  60
   61 PFTVETWFCL MGIILLTAPT LYAINRLAPL KEMRIVGLST VKSCFWYIFG ALLQQGGMYL 120
  121 PTADSGRLVV GFWWIVVIVL VTTYCGNLVA FLTFPKFQPG VDYLNQLEDH KDIVQYGLRN 180
  181 GTFFERYVQS TTREDFKHYL ERAKIYGSAQ EEDIEAVKRG ERINIDWRIN LQLIVQRHFE 240
  241 REKECHFALG RESFVDEQIA MIVPAQSAYL HLVNRHIKSM FRMGFIERWH QMNLPSAGKC 300
  301 NGKSAQRQVT NHKVNMDDMQ GCFLVLLLGF TLALLIVCGE FWYRRFRASR KRRQFTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.221849
Match: 2a5sA
Description: Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.144254316055515 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle