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View Structure Prediction Details

Protein: Ir93a-PC
Organism: Drosophila melanogaster
Length: 637 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ir93a-PC.

Description E-value Query
Range
Subject
Range
gi|26327421 - gi|26327421|dbj|BAC27454.1| unnamed protein product [Mus musculus]
487.0 [0..2] [635..186]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQQFLVISA FHEDIIEIAE TLNMFHVGNQ WMIFVLDMVA RDFDAGTVTI NLDEGANIAF  60
   61 ALNETDPNCQ DSLNCTISEI SLALVNAISK ITVEEESIYG EISDEEWEAI RFTKQEKQAE 120
  121 ILEYMKEFLK TNAKCSSCAR WRVETAITWG KSQENRKFRS TPQRDAKNRN FEFINIGYWT 180
  181 PV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGFVCQELAF PHIEHHFRNI TMDILTVHNP PWQILTKNSN GVIVEHKGIV MEIVKELSRA  60
   61 LNFSYYLHEA SAWKEEDSLS TSAGGNESDE LVGSMTFRIP YRVVEMVQGN QFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.09691
Match: 2ieeA
Description: No description for 2ieeA was found.

Predicted Domain #3
Region A:
Residues: [296-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAAVAATVED PDQKPFNYTQ PISVQKYSFI TRKPDEVSRI YLFTAPFTVE TWFCLMGIIL  60
   61 LTAPTLYAIN RLAPLKEMRI VGLSTVKSCF WYIFGALLQQ GGMYLPTADS GRLVVGFWWI 120
  121 VVIVLVTTYC GNLVAFLTFP KFQPGVDYLN QLEDHKDIVQ YGLRNGTFFE RYVQSTTRED 180
  181 FKHYLERAKI YGSAQEEDIE AVKRGERINI DWRINLQLIV QRHFEREKEC HFALGRESFV 240
  241 DEQIAMIVPA QSAYLHLVNR HIKSMFRMGF IERWHQMNLP SAGKCNGKSA QRQVTNHKVN 300
  301 MDDMQGCFLV LLLGFTLALL IVCGEFWYRR FRASRKRRQF TN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 2a5sA
Description: Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.144254316055515 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle