| Protein: | CG4538-PB |
| Organism: | Drosophila melanogaster |
| Length: | 673 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4538-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
528.0 | [0..1] | [673..1] |
|
Region A: Residues: [1-170] |
1 11 21 31 41 51
| | | | | |
1 MSMVRRIILL GPKYSVWAKG KCSGQTHGSA RCVILSAGSA ENSDCGVRRF HLATRNCARN 60
61 RLMRLEPAMA IPAYIDVTNA HSRTPEDSSE SGSGSEGGAS ASGGSGAKSP GGAAGSGASS 120
121 TSGADPPGGG SDKFLSCPKC GSACTQVETF VSSTRFVKCA KCNYFFVVLS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [171-272] |
1 11 21 31 41 51
| | | | | |
1 EVETKQRTKD EPKNQRKPPP PPQKIMEYLD KHVVGQDFAK KVLAVAVYNH YKRIHHNLPQ 60
61 LQNQGAGASN GAGGGLDGIP RPDLLHITGI GHTLNSSPGN EL
|
| Detection Method: | |
| Confidence: | 2.62 |
| Match: | 1um8A |
| Description: | Crystal structure of helicobacter pylori ClpX |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [273-673] |
1 11 21 31 41 51
| | | | | |
1 PPKSPTQMGM GGGMGGPGLG AGLTGASSSN ARGGGDNRSG SEILDRQSTD VKLEKSNIIM 60
61 LGPTGSGKTL IAQTIAKCLD VPFAICDCTT LTQAGYVGED IESVISKLLQ DANYNVERAQ 120
121 TGIVFLDEVD KIGAVPGIHQ LRDVGGEGVQ QGMLKMLEGT VVNVPERNSP RKLRGETVQV 180
181 DTTNILFVAS GAYTGLDRLI ARRLNEKYLG FGMPSTSGSG RRAAQSAASP MDNDQEERDK 240
241 CLTKVQARDL VEFGMIPEFV GRFPVIVPFH SLNVSMLVRI LTEPRNALVP QYKALLGLDE 300
301 VDLTFTEDAV KSIAQLAMER HTGARGLRSI MEQLLLDPMF IVPGSDIRGV HITADYVKGS 360
361 ATPEYSRDAD AAASGTVATD SDTTTDNDKN FENSEKVRLK Q
|
| Detection Method: | |
| Confidence: | 69.39794 |
| Match: | 1um8A |
| Description: | Crystal structure of helicobacter pylori ClpX |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleotide binding | 0.422354428195324 | bayes_pls_golite062009 |
