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View Structure Prediction Details

Protein: CG31221-PA, CG31...
Organism: Drosophila melanogaster
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG31221-PA, CG31....

Description E-value Query
Range
Subject
Range
gi|91080399 - gi|91080399|ref|XP_966891.1| PREDICTED: similar to Phosphoribosylformylglycinamidine synthase (FGAM ...
196.0 [0..2] [204..2403]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLAMDHHH HHHHQQPRQH HLSMWPSFAV CLLLLQTTTT TMAIDLSRLY GHMANPIVKR  60
   61 SEACHPYEPF KCPGDGNCIS IQYLCDGAPD CSDGYDEDMR LCTAAKRPPV EETASFLQSL 120
  121 IASHGPNYLE KLFGSKARDA LSPLGGVEKV AIALSESQTI EDFGAALHLM RSDLEHLRSV 180
  181 FMAVENGDLG MLKSLGIKDS ELGDVKFFLE KLVNTGFLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 1n7dA
Description: Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle