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View Structure Prediction Details

Protein: FBpp0307026, CG1...
Organism: Drosophila melanogaster
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307026, CG1....

Description E-value Query
Range
Subject
Range
gi|114675079 - gi|114675079|ref|XP_512338.2| PREDICTED: translocase of inner mitochondrial membrane 44 [Pan troglod...
391.0 [0..14] [428..282]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRIAALVRD RACLFTCQQA SQNLQQQQPR FYSAPGRRAG FFSQFFDNMK AEMDKNKEIK  60
   61 DNIRKFREEA QKLEESDALK SARQKFNIVE SEAQKSSSML KEQLGAIKER VGDVLEDASK 120
  121 SHLAKKVTEE LSKKARGVSD TISDTSGKLG QTSAFQAISN TTTTIKKEMD SASIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [176-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRVYRAPAKL RKRVQLVMSD SDRVVEPNTE ATGMELHKDS KFYESWENFK NNNTYVNKVL  60
   61 DWKVKYDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [244-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SENPVIRASR LLTDKVSDVM GGLFSKTELS ETMTELVKID PSFDQKDFLR DCETDIIPNI  60
   61 LESIVRGDLE ILKDWCFEST FNIIANPIKE AKKAGVYLDS KILDIENIEL AMGKVMEQGP 120
  121 VLIITFQAQQ IMCVRDQKSQ VVEGDPEKVM RVHYVWVLCR DRNELNPKAA WRLMELSANS 180
  181 SEQFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.39794
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle