YRC Public Data Repository - Protein Structure Prediction

Protein:	P5cr-PA
Organism:	Drosophila melanogaster
Length:	280 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P5cr-PA.

Description	E-value	Query Range	Subject Range
gi\|40215508 - gi\|40215508\|gb\|AAR82750.1\| RH63285p [Drosophila melanogaster]	211.0	[0..1]	[280..62]
gi\|125773039, gi... - gi\|54637511\|gb\|EAL26913.1\| GA19292 [Drosophila pseudoobscura pseudoobscura], gi\|125773039\|ref\|XP_001... gi\|54637511\|gb\|E... - GA19292-PA [Drosophila pseudoobscura], GA19292 [Drosophila pseudoobscura pseudoobscura]	210.0	[0..1]	[280..1]
gi\|28204459, gi\|... - gi\|28212016\|ref\|NP_782960.1\| pyrroline-5-carboxylate reductase [Clostridium tetani E88], gi\|28204459...	210.0	[0..4]	[280..1]
gi\|67849921, gi\|... - gi\|67916119\|ref\|ZP_00509840.1\| Delta 1-pyrroline-5-carboxylate reductase [Clostridium thermocellum A... gi\|196251994, gi... - gi\|196251994\|ref\|ZP_03150658.1\| pyrroline-5-carboxylate reductase [Clostridium thermocellum DSM 4150...	209.0	[0..4]	[279..1]
gi\|167532035, gi... - gi\|167631737\|ref\|ZP_02390064.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0442], g... gi\|167514661, gi... - gi\|167637154\|ref\|ZP_02395434.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0193], g... gi\|170671266, gi... - gi\|170685006\|ref\|ZP_02876231.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0465], g... gi\|170705216, gi... - gi\|170705216\|ref\|ZP_02895681.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0389], g... gi\|177649865, gi... - gi\|177649865\|ref\|ZP_02932866.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0174], g... gi\|49185927, gi\|... - gi\|49185927\|ref\|YP_029179.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Sterne], gi\|... gi\|47503581, gi\|... - gi\|47528433\|ref\|YP_019782.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. 'Ames Ancest... gi\|30263087, gi\|... - gi\|30263087\|ref\|NP_845464.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Ames], gi\|30... gi\|254760978 - gi\|254760978\|ref\|ZP_05213002.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Australia... gi\|254752460 - gi\|254752460\|ref\|ZP_05204496.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Vollum] gi\|21401019, gi\|... - gi\|65320395\|ref\|ZP_00393354.1\| COG0345: Pyrroline-5-carboxylate reductase [Bacillus anthracis str. A... gi\|254742684 - gi\|254742684\|ref\|ZP_05200369.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Kruger B] gi\|254738146 - gi\|254738146\|ref\|ZP_05195849.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Western N... gi\|254685679 - gi\|254685679\|ref\|ZP_05149538.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CNEVA-906... gi\|229600273, gi... - gi\|229600273\|ref\|YP_002867357.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0248], ...	207.0	[0..4]	[279..1]
gi\|70802403, gi\|... - gi\|70802403\|gb\|AAZ12308.1\| pyrroline-5-carboxylate reductase, putative [Trypanosoma brucei], gi\|6217... gi\|71749908, gi\|... - gi\|72391146\|ref\|XP_845867.1\| pyrroline-5-carboxylate reductase [Trypanosoma brucei TREU927], gi\|7174...	204.0	[0..2]	[279..171]
gi\|42782087, gi\|... - gi\|42782087\|ref\|NP_979334.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 10987], gi\|4273...	202.0	[0..4]	[280..1]
gi\|20807808 - gi\|20807808\|ref\|NP_622979.1\| Pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4... gi\|20807808, gi\|... - gi\|20807808\|ref\|NP_622979.1\| pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4...	202.0	[0..6]	[277..1]
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	202.0	[0..4]	[280..1]

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Predicted Domain #1

Region A:
Residues: [1-280]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLDEKIGF IGGGNMAYAI GSGLVRCGIV KASQVQVSGP HIENLQRWRD LGAVTCDDNC  60
   61 MVLEHSDIVF ICVKPHMLTP CAAQLKYKHV PSAKDASKLV VSVLAGTSLE TLEEAFSFMG 120
  121 SSELKVIRTM PNTSMQVGEG CTVYTGNARV SHHDLEKIHL MLNALGLAQQ VPESMIDAVT 180
  181 GVAGCGPAFV YTIIEALADG GVKQGVPRQM ALQFAAQTLL GAAKTVLLTG KHPAVLRDEV 240
  241 CSPGGATIVG VHELEKGNLR STLINAVEKS SQRSAELGKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.69897
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits