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View Structure Prediction Details

Protein: gukh-PB
Organism: Drosophila melanogaster
Length: 534 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gukh-PB.

Description E-value Query
Range
Subject
Range
gukh-PC - The gene GUK-holder is referred to in FlyBase by the symbol Dmel\gukh (CG31043, FBgn0026239). It is ...
575.0 [0..1] [530..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFVQRVVQP VNVAQATAAS LGHASGRFHC TPGKCRNNNC INKQSPDVEV PNGHGSPTSL  60
   61 TRVLVHQAPE DQPVPPAPAP MKKLKHHVEF LSTSPTRHQS QSLPNSRHPS QQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [114-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PALGRIASAP QSPTAGSSKV VSGHEFDSIS NITLSNALRQ LASLVLIASD IFDDLQRDLQ  60
   61 AVGERAGRVQ RKIAAVERRV CAYDPKTVTV PESDLLTFAQ RKHHFETDKS FQQELFTGET 120
  121 RPLSVRQLYT EAGKELPVAT GATATALASL AHSQSLIPSR SISFNGEVLS SDHEVLQLNG 180
  181 STDTE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [299-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHLLCVSDFG NANRKLRTRI DAEIEIRLPA AIEDLRKWTS SEALGDVTVT PDCMHHVDTS  60
   61 VSTSLAIGEN GILTPALSPS VLSADAVDAL YAQNLSQAAD SSRHNHHTQA LIPNDINKDV 120
  121 PLNH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [423-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLPSPEEQTK QIALKYPAEV ISVNTSGKHF QRMCAARKST SGGYAGGATA GSSSSTSPEN  60
   61 AGQTEGNNLD DNVQTVSRRS RSRKVRGKRR NTIAGIDQKE IQDAANGVST FL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle