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View Structure Prediction Details

Protein: Ssdp-PC, Ssdp-PB...
Organism: Drosophila melanogaster
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ssdp-PC, Ssdp-PB....

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
407.0 [0..41] [443..1377]

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Predicted Domain #1
Region A:
Residues: [1-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGKSKTSAV PSDAQAREKL ALYVYEYLLH VGAQKAAQTF LSEIRWEKNI TLGEPPGFLH  60
   61 TWWCVFWDLY CAAPERRDQC DHSSEAKAFH DYGFVSSGYG VNGIGPGGPH NAGGPAPSPL 120
  121 GQMPPGGDGG PMGPGGPMGP NFFPNSTMRP SPPTHASSPQ PPPSQMMPGQ PPFMGGPRYP 180
  181 GGPRPGVRMQ GMGNEFNGPP GQPMMPNSMD PTRPGGGMGP MNPRMNPPRG PGGMGPMGYG 240
  241 GPGGMRGPAP GPGGMPPMGM GGAGGRPPQW QPNASAPLNA YSSSSPGNYG PGSNGPPGPG 300
  301 TPIMPSPQDN TQGGPVGGPG DSMYALMKPE FPMGGGPDGG GGGGGPGGMG PMGGGPNSMG 360
  361 PVLNGGGGPD GSGLDGMKNS PANGGPGTPR EDSGSGMGDY NLGGFGGPGE NDQTESAAIL 420
  421 KIKESMHEEA KRFEKDTDHP DYFMP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle