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View Structure Prediction Details

Protein: PP2A-B'-PA
Organism: Drosophila melanogaster
Length: 951 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP2A-B'-PA.

Description E-value Query
Range
Subject
Range
gi|148691583, gi... - gi|33285883|gb|AAQ01559.1| protein phosphatase 2A B56 delta subunit [Mus musculus], gi|148691583|gb|...
904.0 [0..382] [951..12]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFGAMLLTG NGLKGPKQQQ QQHQQEPQQQ QQQSQQQQQE QKKPAPIKSS SKEQETQPIA  60
   61 AGYYALGIRI PKSPSFHSGL DQLADDELDD QVQDQQQEQQ QTGSRFRFSS VEELKAKFEG 120
  121 RKTPLSPPEA AAG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [134-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAAGSGAPTT SSSPSSSSTS SNSSASALSS LSQAASSSLA SAAANSSASS SAATYGGGAN  60
   61 SAAAALIASS PFGSQSSTSS LSLSSNAGMS KNAAGAGSGS GSGTTSTGAA SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSLVSTLAQ HFSAATSAAA SAAAAAASSA SAASSSSASS SSTATNNAAS SSIAASKSPV  60
   61 SAAAAIKNIL NATKSVGTSA AAAAAAAATS SSSSPSSAAA VPSSA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [351-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATAVAAVPTT SDVPAEEMRP TVAQNLVGGI SISLGIGQRN GGAAPASSAV MVTPNATMVV  60
   61 TTSSLSIRQN GDILPGHPAG LQPSPQTLQQ L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [442-951]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGSPGRARDR NLFYTPPTAS VAMALPALRE TAASEREELF IQKIQQCCTL FDFSEPLSDL  60
   61 KFKEVKRAAL HEMVDFLTNQ NGVITEVIYP EAINMFAVNL FRTLPPSSNP NGAEFDPEED 120
  121 EPTLESSWPH LQLVYELFLR FLESPDFQPS MAKRFIDHQF VLQLLDLFDS EDPRERDFLK 180
  181 TVLHRIYGKF LGLRAFIRKQ INNVFYRFIY ETEHHNGIAE LLEILGSIIN GFALPLKEEH 240
  241 KQFLLKVLLP LHKAKSLSVY HPQLTYCVVQ FLEKDPSLSE AVIKSLLKFW PKTHSPKEVM 300
  301 FLNELEELLD VIEPAEFQKV MVPLFRQIAK CVSSPHFQVA ERALYYWNNE YIMSLITDNS 360
  361 AVILPIMFPA LNRNSKTHWN KTIHGLIYNA LKLFMEIDQR LFDECSKNYK QEKQMEREKL 420
  421 SQREELWQQV ESLAKTNPEW TKARRFNDCL PVSDSRALCD QYSENSDSAY DQSEQRARQP 480
  481 PPPLPPQKQA HQEPREVRQA LATLTTLNNY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nppB
Description: No description for 2nppB was found.

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