YRC Public Data Repository - Protein Structure Prediction

Protein:	CG5840-PA
Organism:	Drosophila melanogaster
Length:	273 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5840-PA.

Description	E-value	Query Range	Subject Range
gi\|218541204, gi... - gi\|218898056\|ref\|YP_002446467.1\| pyrroline-5-carboxylate reductase [Bacillus cereus G9842], gi\|21854... gi\|228858122, gi... - gi\|228901519\|ref\|ZP_04065702.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 4222],... gi\|228908746, gi... - gi\|228908746\|ref\|ZP_04072580.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis IBL 200], ... gi\|75764862, gi\|... - gi\|75764862\|ref\|ZP_00744228.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar isr...	211.0	[0..3]	[273..1]
gi\|42782087, gi\|... - gi\|42782087\|ref\|NP_979334.1\| pyrroline-5-carboxylate reductase [Bacillus cereus ATCC 10987], gi\|4273...	209.0	[0..3]	[273..1]
gi\|163862929, gi... - gi\|89208025\|ref\|ZP_01186549.1\| Delta 1-pyrroline-5-carboxylate reductase [Bacillus weihenstephanensi...	209.0	[0..3]	[273..1]
gi\|67849921, gi\|... - gi\|67916119\|ref\|ZP_00509840.1\| Delta 1-pyrroline-5-carboxylate reductase [Clostridium thermocellum A... gi\|196251994, gi... - gi\|196251994\|ref\|ZP_03150658.1\| pyrroline-5-carboxylate reductase [Clostridium thermocellum DSM 4150...	208.0	[0..3]	[270..1]
gi\|28204459, gi\|... - gi\|28212016\|ref\|NP_782960.1\| pyrroline-5-carboxylate reductase [Clostridium tetani E88], gi\|28204459...	208.0	[0..3]	[270..1]
gi\|254742822 - gi\|254742822\|ref\|ZP_05200507.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Kruger B] gi\|254738005 - gi\|254738005\|ref\|ZP_05195708.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Western N... gi\|118478317, gi... - gi\|118478317\|ref\|YP_895468.1\| pyrroline-5-carboxylate reductase [Bacillus thuringiensis str. Al Haka... gi\|254722951 - gi\|254722951\|ref\|ZP_05184739.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A1055] gi\|254682347 - gi\|254682347\|ref\|ZP_05146208.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CNEVA-906... gi\|254760838 - gi\|254760838\|ref\|ZP_05212862.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Australia... gi\|254752322 - gi\|254752322\|ref\|ZP_05204358.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Vollum] gi\|49179716, gi\|... - gi\|49185789\|ref\|YP_029041.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Sterne], gi\|... gi\|196026096, gi... - gi\|196042612\|ref\|ZP_03109851.1\| pyrroline-5-carboxylate reductase [Bacillus cereus 03BB108], gi\|1960... gi\|177649767, gi... - gi\|177649767\|ref\|ZP_02932769.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0174], g... gi\|170130686, gi... - gi\|170704885\|ref\|ZP_02895351.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0389], g... gi\|170685208, gi... - gi\|170685208\|ref\|ZP_02876432.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0465], g... gi\|167514164, gi... - gi\|167637615\|ref\|ZP_02395894.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0193], g... gi\|167632683, gi... - gi\|167632683\|ref\|ZP_02391010.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0442], g... gi\|165868381, gi... - gi\|165868381\|ref\|ZP_02213041.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0488], g... gi\|47503437, gi\|... - gi\|47528289\|ref\|YP_019638.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. 'Ames Ancest... gi\|30257583, gi\|... - gi\|30262950\|ref\|NP_845327.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. Ames], gi\|30... gi\|229268028, gi... - gi\|229603620\|ref\|YP_002867233.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. A0248], ... gi\|228915579, gi... - gi\|228915579\|ref\|ZP_04079166.1\| Pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar pu... gi\|227004694, gi... - gi\|227814202\|ref\|YP_002814211.1\| pyrroline-5-carboxylate reductase [Bacillus anthracis str. CDC 684]...	207.0	[0..3]	[273..1]
gi\|52142529, gi\|... - gi\|52142529\|ref\|YP_084300.1\| pyrroline-5-carboxylate reductase [Bacillus cereus E33L], gi\|51975998\|g...	207.0	[0..3]	[273..1]
gi\|49330599, gi\|... - gi\|49479043\|ref\|YP_037056.1\| pyrroline-5-carboxylate reductase [Bacillus thuringiensis serovar konku...	207.0	[0..3]	[273..1]
gi\|89159827, gi\|... - gi\|89210565\|ref\|ZP_01188953.1\| Delta 1-pyrroline-5-carboxylate reductase [Halothermothrix orenii H 1...	207.0	[0..6]	[271..2]

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Predicted Domain #1

Region A:
Residues: [1-273]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIGKIGFL GGGNMAKALA KGFLAAGLAK PNTLIASVHP ADKLSLQSFQ SLGVETVIKN  60
   61 APVVQQSDVV FVSVKPQVVP SVLSEIQPLS SGKLFLSVAM GITLSTIESS LSPQARVIRV 120
  121 MPNLPAVVCS GCSVFVRGSK ATDADADITQ KLLQSVGTCE PVDESQLDVV TALSGSGPAY 180
  181 VFVMIEALAD GAVHMGMPRD LAYRLASQTV LGAGHMVRDS GMHPGQLKDG VTSPAGSTAA 240
  241 ALRQLELSGF RAAVSGAVEQ ATLRCRQISG KTK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.045757
Match:	2izzA
Description:	No description for 2izzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits