YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0306950, Eh-PA
Organism:	Drosophila melanogaster
Length:	97 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306950, Eh-PA.

Description	E-value	Query Range	Subject Range
gi\|194102024, gi... - gi\|195144194\|ref\|XP_002013081.1\| GL23932 [Drosophila persimilis], gi\|194102024\|gb\|EDW24067.1\| GL2393... gi\|54638062, gi\|... - gi\|54638062\|gb\|EAL27464.1\| GA18853 [Drosophila pseudoobscura pseudoobscura], gi\|125774135\|ref\|XP_001... gi\|54638062\|gb\|E... - GA18853-PA [Drosophila pseudoobscura], GA18853 [Drosophila pseudoobscura pseudoobscura]	139.0	[0..1]	[97..1]
gi\|208239 - gi\|208239\|gb\|AAA72999.1\| eclosion hormone	116.0	[0..12]	[96..5]
ECLH_BOMMO - Eclosion hormone OS=Bombyx mori PE=1 SV=2	115.0	[0..16]	[96..18]
gi\|110295235 - gi\|110295235\|gb\|ABG66962.1\| eclosion hormone precursor [Ostrinia furnacalis]	106.0	[0..19]	[96..19]
ECLH_MANSE - Eclosion hormone OS=Manduca sexta PE=1 SV=2	105.0	[0..7]	[96..5]
gi\|55979134 - gi\|55979134\|gb\|AAV69026.1\| eclosion hormone precursor [Helicoverpa armigera]	102.0	[0..9]	[96..10]
gi\|108872486, gi... - gi\|157128758\|ref\|XP_001661508.1\| eclosion hormone, putative [Aedes aegypti], gi\|108872486\|gb\|EAT3671...	97.0	[0..8]	[96..9]

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Predicted Domain #1

Region A:
Residues: [1-97]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCKPLILCT FVAVAMCLVH FGNALPAISH YTHKRFDSMG GIDFVQVCLN NCVQCKTMLG  60
   61 DYFQGQTCAL SCLKFKGKAI PDCEDIASIA PFLNALE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	51.356547
Match:	PF04736.3
Description:	No description for PF04736.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.844	N/A	N/A	a.74.1	Cyclin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits