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View Structure Prediction Details

Protein: FBpp0308299, Pat...
Organism: Drosophila melanogaster
Length: 968 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308299, Pat....

Description E-value Query
Range
Subject
Range
gi|54638824, gi|... - gi|54638824|gb|EAL28226.1| GA18738-PA [Drosophila pseudoobscura], gi|125775844|ref|XP_001359083.1| G...
498.0 [0..1] [968..1]

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Predicted Domain #1
Region A:
Residues: [1-632]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDSFFGFDT NLPDEDGGDG RIVEAEYDAL NDETFGSAIN GDWEEAHETM VRLGGNGERV  60
   61 RKRPAESSGN TDFADQGNGA FLRHANPLSS APSSSGSTPA PLNAPFRQSR HIGDSDLELN 120
  121 ISSMKLDDMD LSSFTTDSEA GGLSNRIKLD SGVWGSQPFP NNQHLFREPM RSAFKPQQQQ 180
  181 HQQHQPQQMK PPQEANANFA LNPQPFPKIT TLEDIERNMI IQQAIPKQQQ QSQQQAERKM 240
  241 FDDFSLGNRQ QVPTPTMLQQ QMLQQQHHQK QQSQQQPPQQ AQHKVPPGFL GTPHTSPPRP 300
  301 NLGFPGPELL PTPSSQQQLN GIGGNRVPPG FIYPQGLPGN IPQLPQHPLM QQHMPHNFPL 360
  361 PGGNQRPLPN PQALPTALNN FAMHPSFNAM RAAGIHPGAF MQPPHPHQML PPRMPPHPLQ 420
  421 AATSLLGQQP PNSMYNMFNM RLVQEIQQNH PLLQQAAVVR QMQQSRAGSV ASDRQRSQAQ 480
  481 QQQQGRRPDG TGNYPLEEYD EYANLMSTRD KHWLIGIQLS QLNTDTPYID DYYYTVFRER 540
  541 KAQQNGQMRN SQAHKDNQLN HPLTQPRGHA QLILVQLGNK NGTRNGHGRE RRNSENTNST 600
  601 SGNTNNGSGG NNNNLTGYIF SPLKFENSLG KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [633-778]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QYGSVTAPRK IIDADIMSGE SNAAAEANAT SSSKSSTPLP TSASHDVNPS SMRKSRHILL  60
   61 LIETLYRYLL KLEDLESPEV MATIELKKKK EAERIAALEQ LEMANKTPEE RAAEAANPQT 120
  121 MNPQLKNKFN YEVETKAALV NKLKAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [779-968]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAFDKVIAMM NVRKGKILIR RIMPFIADQS IRWVVWSGVF CSLQTVVKKD KDDVEGVLYA  60
   61 LYPEFKKHVN KATFELLVSI SSAITLNDKK LAGIFCSRFG ILSLVALILR AEEIYVSRTD 120
  121 ATLSEENRQK WREFLAQVAS CLNRTIQNQT ISAAIESDAI QPLMDHFERF KDLKLDALLA 180
  181 LITEARHQID 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle