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View Structure Prediction Details

Protein: Fas1-PB
Organism: Drosophila melanogaster
Length: 652 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fas1-PB.

Description E-value Query
Range
Subject
Range
Fas1-PC - The gene Fasciclin 1 is referred to in FlyBase by the symbol Dmel\Fas1 (CG6588, FBgn0000634). It is ...
440.0 [0..27] [652..27]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNAAALLLA LLCAANAAAA ADLADKLRDD SELSQFYSLL ESNQIANSTL SLRSCTIFVP  60
   61 TNEAFQRYKS KTAHVLYHIT TEAYTQKRLP NTVSSDMAGN PPLYITKNSN GDIFVNNARI 120
  121 IPSLSVETNS DGKRQIMHII DEVLEPLTVK AGHSDTPNNP NALKFLKNAE EFNVDNIGVR 180
  181 TYRSQVTMAK KESVYDAAGQ HTFLVPVDEG FKLSARSSLV DGKVIDGHVI PNTVIFTAAA 240
  241 QHDDPKASAA FEDLLKVTVS FFKQKNGKMY VKSNTIVGDA KHRVGVVLAE IVKANIPVSN 300
  301 GVVHLIHRPL MIIDT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.75
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [316-652]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVTQFLQSFK ENAENGALRK FYEVIMDNGG AVLDDINSLT EVTILAPSNE AWNSSNINNV  60
   61 LRDRNKMRQI LNMHIIKDRL NVDKIRQKNA NLIAQVPTVN NNTFLYFNVR GEGSDTVITV 120
  121 EGGGVNATVI QADVAQTNGY VHIIDHVLGV PYTTVLGKLE SDPMMSDTYK MGKFSHFNDQ 180
  181 LNNTQRRFTY FVPRDKGWQK TELDYPSAHK KLFMADFSYH SKSILERHLA ISDKEYTMKD 240
  241 LVKFSQESGS VILPTFRDSL SIRVEEEAGR YVIIWNYKKI NVYRPDVECT NGIIHVIDYP 300
  301 LLEEKDVVVA GGSYLPESSI CIILANLIMI TVAKFLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.522879
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle