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View Structure Prediction Details

Protein: CG10345-PA
Organism: Drosophila melanogaster
Length: 552 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10345-PA.

Description E-value Query
Range
Subject
Range
gi|125773499, gi... - gi|54637743|gb|EAL27145.1| GA10261 [Drosophila pseudoobscura pseudoobscura], gi|125773499|ref|XP_001...
gi|54637743|gb|E... - GA10261-PA [Drosophila pseudoobscura], GA10261 [Drosophila pseudoobscura pseudoobscura]
551.0 [0..1] [549..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFTNKNQR NAKLLRSAAL GMTLLFFGSL VIISDPLQSI LDTQLSLKPG TLLHRLWLLP  60
   61 PLDVYINVYM FNYTNVDEFT SGRASKLQLQ EVGPYVYKEV LSNHNVTYNE SNNTITYSPK 120
  121 REYVFAPERS VG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKIDRIRAP NIPLMGVTTL ASSLSMFAAL GLSAITRQLN SQPMLEMSVH DYMWGYEDHL  60
   61 VELASRFVPN WIDFSSFGIM EKLFREGNES NVFNMNLPEP KDKYGMRMTD APRGYTVDSI 120
  121 NGERGFKGWQ YNEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [267-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNGTMCNRIW GSHDATLFPL DMDENDEFFL YRRTFCRRLP VKFNRTTTFN GLDAFEFVME  60
   61 PDSFDSEVDN ANSSCYCKNN RCLKKGVGNV SPCYYN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [363-552]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPLAITYPHF MHADPSLLEP FDGLQPNVSR FTSTFVVQPQ LGAPMQGTHL RLQANQVVGK  60
   61 VNFNRMMTPF ENMILPLLWV DLNIDVLCLT LRLLIHGIKW GFPLLQWSAA LGMLLAGVYQ 120
  121 LCSALLLCFW PTARQFQKVD QVERGTAVQV IGVGLGLATG LRKPSIHLDP EEQHHLLLGG 180
  181 GSFIPKMAKT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle