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View Structure Prediction Details

Protein: Mat89Bb-PA
Organism: Drosophila melanogaster
Length: 689 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mat89Bb-PA.

Description E-value Query
Range
Subject
Range
C12orf11 - chromosome 12 open reading frame 11
gi|114645572, gi... - gi|114645574|ref|XP_001144386.1| PREDICTED: similar to Chromosome 12 open reading frame 11 isoform 4...
1086.0 [0..1] [678..3]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFERNQKTIF VLDHTRYFSI ASEEYISMDF LKGKPSADGG ATGAAGNATG SGGSQFSKSL  60
   61 WTCACESSIE YCRVVWDLFP GKKHVRFIVS DTAAHIVNTW RPSTQNMAHV MNAMLIVGVP 120
  121 SRNVPTSSDY SVIHGLRAAI EALAEPTDEQ LAAMADFGTD ELPRIPNKGR VICITSARDN 180
  181 TSMKSLEDIF NTVLVQQNTL AAPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKKGLVIDHC HLVILNIVPL GVESLVTNRS LLKISPLLDV EIHTVSAPDI SYKLTHLILN  60
   61 HYDLASTTVT NIPMKEEQNA NSSANYDVEI LHSRRAHSIT CGPDFSLPTS IKQGATYETV 120
  121 TLKWCTPRGC GSADLQPCLG QFLVTPVDVT SRPSSCLINF LLNGRSVLLE MPRKTGSKAT 180
  181 SHMLSARGGE IFVHSLCITR SCMDEAPSIT DGPGGRVSDY RTAELGQLIK MS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [437-689]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVVPLKVKDP SAPPLTRRLP RYFPLTTSSS ILFHLQRHIS WLPHFLHLLV KEDMDKQDEV  60
   61 RCQQHIHELY KSASRGDVLP FTHTNGARLK LSKAKDQYRL LYRELEQLIQ LNATTMHHKN 120
  121 LLESLQSLRA AYGDAPLKSE PGASLLRTYT ESPLSPERLE PISSVGASGS SSSNSLLKAS 180
  181 KRRMSSCGQR SLLDIISSAE RSQSNKRLDF SGRLCTPLGQ VAKLYPDFGT KDKDTVTTGA 240
  241 SITPNVKEES VRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle