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View Structure Prediction Details

Protein: Sap47-PE, Sap47-...
Organism: Drosophila melanogaster
Length: 551 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sap47-PE, Sap47-....

Description E-value Query
Range
Subject
Range
Sap47-PG - The gene Synapse-associated protein 47kD is referred to in FlyBase by the symbol Dmel\Sap47 (CG8884,...
353.0 [0..1] [551..1]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSGLTNQFT SLVGAVKGGA GDEDVPAPTG DAPAAAPAAS TSVEATASSA VDPEAAAAAG  60
   61 GEGLEGEEAG KRLPKSASLV DSLVSEATGW LGSAKGWLGN ASIPSMPAMP SMPSMPAMPA 120
  121 MPSIPSIPGL RKGAGADGAE GAEGAVAGEG GAAASGAVSG GEDDDKSRYI SATEGADSHP 180
  181 ASGGGTPTGD EGQIGQGKGD EVKITTKVTQ QAKHFGSFLS SAISKAGSKI KETVKDNTIL 240
  241 DSFNKEQEAF IKGQGGVGNG AAPWIGHANE AKIKEEILGL SQDRRNFVRA PPAGVDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.39794
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [298-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFSYDTAYPT AIAIMAEDKA LETMRFELVP KIITEENFWR NYFYRVSLII QAAELGTLGA  60
   61 DGVGQASSGE DANEVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1x3aA
Description: Solution structure of the BSD domain of human Synapse associated protein 1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [374-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKEKKSKTAE PAKGDSSVKA IAEQPKAVIE PEAQECDVQA AKSKAKAKAQ AGKELGQKIS  60
   61 ESEFVSDDFQ ASSESDLAEI QDGMRKLGID SMTQQALAAT DEEQWEKDLE AELKDYEVVD 120
  121 EGGTGGDGGG GRRKGRKAGE DDTEADEDEP TISNLRTRST NNDWEEYADL IEDTDDLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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