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View Structure Prediction Details

Protein: FBpp0306142, pxb-PB
Organism: Drosophila melanogaster
Length: 636 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306142, pxb-PB.

Description E-value Query
Range
Subject
Range
TCNA_TRYCR - Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
218.0 [0..128] [633..601]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKMLDMMEL SEAELFMFDC DDCSGTPLAP PPQFLIPPPP RPPALAEFTV VPQDCNEEQL  60
   61 AQQQWESDVC QAMPILDASL YSSQSLATSA MIAVFSLLLV LIVLISSLFV WKNKRKVQNL 120
  121 LPCKTPTRGP LNGAMPLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGTLGSAHHH HHHGMYEDPD AHLGHHRPLV MHRHHHHQQL AHHHHYQQHH SELLQGKSIH  60
   61 YPSGYPMTRS PPFLVSSSPG PDPYRSNDNV YEELGPGRVD SDGESEPPLH SDDDFAEDEL 120
  121 SLPGECSFQK ETNLPAAAGA TPY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [282-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HERAAGSSSS GTGVAGVAGA TGSVATSASL PQAVQERHSV LSSGSSMGQD TSTATASSAS  60
   61 NNNHELASGS NNRRTGRTRQ SRSSQDQDLN NSTSTADIAD LAPLYDNRSN LMSLGYVARS 120
  121 TAPQFYNTLE HEVERRNRIN AQLSKAPVPP LSTIYRERIR YPHASQQYPS SVASGLMAAT 180
  181 MRARTQPRVL DRRLAPHQH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [481-636]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHHRIHAAPM AQEPSYCYAE PMYNANYYYE SAGGARPYAS TLLPTAADYR HPYGDSSFGS  60
   61 DSGYSHHTPA SSIGRQDYDV AEPQVLTQPK PSKLSSALNF SWNRNSRSKG TSGGAIAKTS 120
  121 GNSSNSSATS PNNNSSACST VTSQLENNNT ASLSPA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle