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View Structure Prediction Details

Protein: CG5044-PA
Organism: Drosophila melanogaster
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5044-PA.

Description E-value Query
Range
Subject
Range
CG5044-PB - This gene is referred to in FlyBase by the symbol Dmel\CG5044 (CG5044, FBgn0038326). It is a protein...
367.0 [0..2] [385..3]

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Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPIQRLVYT FGHRTCSQLP MIGGATISQT KPTTMALSVR QSSSSVLATE SSNKGMIILN  60
   61 RPKALNAINL EMVRKIYKHL KKCEKSKSLV IIKGTGDKAF CAGGDVRALV EAGPTDESKS 120
  121 FFREEYSTNA LIGNYKIPYI AIIDGITMGG GVGLSVHGKY RVASDRTLFA MPETAIGLFP 180
  181 DVGGSYFLPR LQGKLGLYLG LTGYRLRGAD VYYSGIATHY CESSKIPDLE TALLNCPDAD 240
  241 DVPELLQKYH SPPEKPFSLQ PVLEQINKNF SADSVEGILE NLQND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.39794
Match: 2hw5A
Description: No description for 2hw5A was found.

Predicted Domain #2
Region A:
Residues: [286-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSEWAKKTLE TLSKMSPTSM KVTFRQLELG SQLSLAQCLI MEYRLAVRHL ERSDFKEGVR  60
   61 ALLIDKDQKP QWQPTKLADV TEEHVQWFFR KLPDTEELKL 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.75
Match: 1nzyA
Description: 4-Chlorobenzoyl-CoA dehalogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle