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View Structure Prediction Details

Protein: Aats-ser-PA, FBp...
Organism: Drosophila melanogaster
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Aats-ser-PA, FBp....

Description E-value Query
Range
Subject
Range
gi|67155739|ref|... - Seryl-tRNA synthetase, class IIa [Azotobacter vinelandii AvOP]
gi|67155739, gi|... - gi|67155739|ref|ZP_00417366.1| Seryl-tRNA synthetase, class IIa [Azotobacter vinelandii AvOP], gi|67...
407.0 [0..1] [401..199]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPTNSQLW RPLLLLRRQR SHDAKAVEAP IHRPVPTSAQ LDELERNVVV RHHKNNVPLI  60
   61 RSLIQELDAG DQHKLRQLQA ELEQLPNATH PRLRDYGEEP RELAQYVHRQ LTPQSRLKEF 120
  121 SELARALNLY RMDHLGNYTG HKSYYLTGQL ATLEQAIIQY ALQAVTEHGF KLISVPDILP 180
  181 KEVIESCGMR TEGERTQVYK LDTGECLSGT SEMALAGFFA NKLLSEDQLP LKVTAVSRCY 240
  241 RAETSGLQEE KGIYRVHQFN KVEMFAICTE EQSEAELEEF KNIEVDLFRR LGLNFRLLDM 300
  301 PPCELGAPAY QKYDIEAWMP GRQMWGEISS CSNCTDYQAR RLGIRYRRSA DGQILHAHTI 360
  361 NGTATAIPRL LIALLESYQK EDGIEIPAVL RPFMDNQELI TRNKRIPETK LVKFIKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.09691
Match: 1wleA
Description: Crystal Structure of mammalian mitochondrial seryl-tRNA synthetase complexed with seryl-adenylate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle