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View Structure Prediction Details

Protein: Sra-1-PA
Organism: Drosophila melanogaster
Length: 1291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sra-1-PA.

Description E-value Query
Range
Subject
Range
gi|559703 - gi|559703|dbj|BAA07552.1| KIAA0068 [Homo sapiens]
2261.0 [0..1] [1275..19]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKITLADA LSNVEVLDEL SLPDEQPCIE AQPCSIIYKA NFDTNFEDRN GFVTGIAKYI  60
   61 EEATTHANLN VLLDEGQKHA VMLYTWRCCS RAIPQPKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.533 a.29.2 Bromodomain
View Download 0.450 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.386 a.24.14 FAT domain of focal adhesion kinase
View Download 0.350 a.24.3 Cytochromes
View Download 0.346 a.7.7 BAG domain

Predicted Domain #2
Region A:
Residues: [99-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEQPNRVEIY EKTVEVLAPE VNKLLNFMYF QRKAIEAFSG EVKRLCHAEK RKDFVSEAYL  60
   61 LTLGKFINMF AVLDELKNMK SSVKNDYSTY RRAAQFLKVM SDSHTLQESQ NLSMFLATQN 120
  121 KIRDTVKDTL EKIVGYEDLL SDVVNICVHM FETKMYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPEEKHMLVK VMGFGLFLMD SDACNINKLD QKKKIRLDRI DRIFKNLEVV PLFGDMQIAP  60
   61 FNYIKRSKHF DSSKWPLSSS NA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [338-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISPQADLMVH LPQIREDHVK YISELARYTN EVTTTVKENP SDAENRITAD LALRGLQLLS  60
   61 EWTSVVTELY SWKLLHPTDH HQNKECPVEA EEYERATRYN YTSEEKFALI EVIAMIKGLQ 120
  121 VLMARIETVL CEAIRRNIYS ELQDFVQLSL REPLRKAVKN KKDLIRSIIM SVRETSADWQ 180
  181 KGYEPTDDPV AKGKKDPDGG FRIQVPR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [545-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNVGPSSTQL YMVRTMLESL IADKSGGKRT LRKDIDGNCL LQIDTFHKTS FYWSYLLNFS  60
   61 DTLQKCCDLS QLWYREFYLE MTMGRKVNKC LVRHQHN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [642-810]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EECKDLITME KRIQFPIEMS MPWILTDHIL QTKEPSMMEF VLYPLDLYND SAYYALTVFR  60
   61 KQFLYDEVEA EVNLCFDQFV YKLSEQIFAH YKQLAGSIFL DKRFRLECEV LGFNFQSYPR 120
  121 NNRYETLLKQ RHVQLLGRSI DLNKLITQRI NANMHKSIEL AISRFEGND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [811-911]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITGIVELEGL LEANRICHKL LSKYLALDNF DGMVKEANHN VLAPYGRITL HVFVELNYDF  60
   61 LVNYCYNAAT NRFIRTKVNL SSSQAIQREK PPQMSHYYLW G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [912-990]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKQLNAAYST QYGQYTGFVG SPHFHAMCRL LGYQGIAVVM DIILKDIVKP LIQGSLLQFT  60
   61 KTLMIAMPKS CKLPRCEYG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [991-1036]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPGVLSYYQA HLTDIVQYPD AKTELFQSFR EFGNSIIFCL LIEQAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1037-1136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQEEVCDLLH AALFQNIFPR PFCKENEKPE AKQKRLEAQF ANLQIVSNVE KIGTAKQAMI  60
   61 AREGDLLTRE RLCCGLSIFE VILNRVKSYL DDPVWCGPPP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1137-1291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANGIIHVDEC SEFHRLWSAL QFVYCIPVRG TEYTIEELFG EGLNWAGCVM IVLLGQQRRF  60
   61 EALDFCYHIL RVQRVDGKDE DVKGIQLKRM VDRIRRFQVL NSQIFSILNK YLKGGDGEGS 120
  121 NVEHVRCFPP PQHPSVISSS SHYQDPQKLR QSINN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle