YRC Public Data Repository - Protein Structure Prediction

Protein:	Set-PA
Organism:	Drosophila melanogaster
Length:	269 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Set-PA.

Description	E-value	Query Range	Subject Range
gi\|51464263, gi\|... - gi\|51464263\|ref\|XP_371701.2\| PREDICTED: similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-...	278.0	[0..3]	[231..113]
gi\|34851993, gi\|... - gi\|60499029\|ref\|NP_001012522.1\| SET translocation [Rattus norvegicus], ref\|XP_226569.2\| similar to A...	278.0	[0..4]	[229..12]
gi\|53734421 - gb\|AAH84006.1\| Unknown (protein for MGC:98162) [Xenopus laevis] SET_MOUSE - Protein SET OS=Mus musculus GN=Set PE=1 SV=1	276.0	[0..4]	[229..12]
gi\|73968092 - gi\|73968092\|ref\|XP_851207.1\| PREDICTED: similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-...	272.0	[0..1]	[229..9]
gi\|109110118 - gi\|109110118\|ref\|XP_001110539.1\| PREDICTED: similar to Protein SET (Phosphatase 2A inhibitor I2PP2A)...	268.0	[0..24]	[229..36]

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Predicted Domain #1

Region A:
Residues: [1-269]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVPKRAKL DGAPADGNTS AAAGNNEEES EALEQIDACQ NEIDALNEKA SEEILKVEQK  60
   61 YNKLRKPCYE KRSELVKRIP NFWVTSFINH PQVSGILDEE EEECLHALNK LEVEEFEDIK 120
  121 SGYRINFHFD ENPYFENKVL TKEFHLNSAA ASENGDWPAS TSTPIKWKEG KNLLKLLLTK 180
  181 PYGNKKKRNS EYKTFFDWFS DNTDPVNDEI AELIKDDLWP NPLQYYLVPD IEVEPEDEED 240
  241 NEDNDEEAFD DEDGEDGEGE EEEEDEDDK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	68.69897
Match:	2e50A
Description:	No description for 2e50A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits