YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Orc2-PA
Organism: Drosophila melanogaster
Length: 618 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Orc2-PA.

Description E-value Query
Range
Subject
Range
gi|1136134 - gi|1136134|gb|AAC46955.1| DmORC2
571.0 [0..1] [618..1]

Back

Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASNKGGYK TPRKENLMSI ENLTNSEEES EDLNTAMVGN AVESQPKVTS RRSTRRPSPT  60
   61 KKYQAYQKES NGKGQEERIV VNYVEMSDER SSDAEDQEEE ESIEESENAA RPAAKDLHLI 120
  121 QSEYNVAGTS MFGFNTPKKR DAMALAALNA TPCTPKTPKT PRLGVKTPDT KRKKSMDQPK 180
  181 TPAHVRTRVK KQIAKIVADS DEDFSGDESD FRPSDEESSS SSSSSDAGNS SDNDAADDEP 240
  241 KTPSR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [246-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARRAIVVPVL PKTPSAARLR QSARAKKSNE FVPESDGYFH SHASSKILTS DHTLDRLKNP  60
   61 RLAADRVFSL L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEIKTSAEHE GSINAIMEEY RSYFPKWMCI LNEGFNILLY GLGSKHQLLQ SFHREVLHKQ  60
   61 TVLVVNGFFP SLTIKDMLDS ITSDILDAGI SPANPHEAVD MIEEEFALIP ETHLFLIVHN 120
  121 LDGAMLRNVK AQAILSRLAR IPNIHLLASI DHINTPLLWD QGKLCSFNFS WWDCTTMLPY 180
  181 TNETAFENSL LVQNSGELAL SSMRSVFSSL TTNSRGIYML IVKYQLKNKG NATYQGMPFR 240
  241 DLYSSCREAF LVSSDLALRA QLTEFLDHKL VKSKRSVDGS EQLTIPIDGA LLQQFLEEQE 300
  301 KK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle