| Protein: | Ir87a-PA |
| Organism: | Drosophila melanogaster |
| Length: | 806 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ir87a-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
488.0 | [0..2] | [783..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MGVDQSFVCG MSTPEQRFWL AALLFLLSQH SEVRGFGINL MKVQTEDKGQ EACILALLRK 60
61 YFDSGDGLSG SVLCINRNYQ LPNIEEQLLR GVNNYENYPW SLLITNSREG PS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [113-331] |
1 11 21 31 41 51
| | | | | |
1 PAKFLMNEKP QCYFLIVDNL EDEDLDEVFE HWKGMVNWNP LAQFVVYLAS LEETDEEMND 60
61 LMVELLLTFI NKKIFNVNVI GQSEENQFYY GKTVFPYHPD NNCGNRVISV ELLDACDYPS 120
121 EETDSEDEND EDEGDGAQEE DDGPQEEGDG EQEEEDGPQE QEDGDQAKGD EGQENDDGGL 180
181 ENKVENEFRI GASDDDELEN DLSSNSSEPE AIIEEFFRA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [332-410] |
1 11 21 31 41 51
| | | | | |
1 KFEDKFPRDL SGCPLTASFR PWEPYIFRNS EEQPVDDYYY GLQGDEDDYN DTSPNYGESD 60
61 DESYADPGED GDGAIPDTE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [411-595] |
1 11 21 31 41 51
| | | | | |
1 TQSGGKLKLS GIEYEMVQTI AERLHVSIEM QGENSNLYHL FQQLIDGEIE MIVGGIDEDP 60
61 SISQFVSSSI PYHQDELTWC VARAKRRHGF FNFVATFNAD AGFLIGIFVV TCSLVVWLAQ 120
121 RVSGFQLRNL NGYFPTCLRV LGILLNQAIP AQDFPITLRQ LFALSFLMGF FFSNTYQSFL 180
181 ISTLT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [596-806] |
1 11 21 31 41 51
| | | | | |
1 TPRSSYQIHT LQEIYSNKMT VMGTSEHVRH LNKDGEIFKY IREKFQMCYN LVDCLNDAAQ 60
61 NEHIAVAVSR QHSFYNPRIQ RDRLYCFDRR ESLYVYLVTM LLPKKYHLLH QINPVIQHII 120
121 ESGHMQKWAR DLDMRRMIHE EITRVREDPF KALTFDQFRG AIAFSGGLLL VASCVFAFEL 180
181 CYVKYVYRTE KRERKTKKIT KKVHNIKIQH D
|
| Detection Method: | |
| Confidence: | 30.154902 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
