YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Ravus-PA
Organism: Drosophila melanogaster
Length: 359 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ravus-PA.

Description E-value Query
Range
Subject
Range
gi|54638224, gi|... - gi|54638224|gb|EAL27626.1| GA14007-PA [Drosophila pseudoobscura], gi|125774457|ref|XP_001358487.1| G...
372.0 [0..1] [359..1]

Back

Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLQLTQEK LDALRSEYRP RRPCALLKYP RPKTKPEYQA IYPWLLPDET DPHFVFCAVC  60
   61 ECRLSCKRSD LGKHEGSIKH SENAQRKSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAKANNSSFN GSSSGAMKWE DTEDEEGLLQ YGTDPQDDET EDEEEGELDE TEGDCEDDEK  60
   61 RTQELEAQND LETEPVIKQQ RRTSETDSQN SGMLDYLPLH VTINEGPQSL P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [201-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTVSAYPTSS ATATVAPPCR ITIKKVPVHS TPLSGMCQAQ EINSKATITP IHTTPSYAAR  60
   61 PLQSYQLQPL SPITPPRDSL ELFFDSICAT VKNLPPKLAT EGKIRVMQLI GELELRALCE 120
  121 QEALSEVAGL PDLAGNSRSG AAEASGSGQQ NATVASTTK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle