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View Structure Prediction Details

Protein: Arp87C-PA
Organism: Drosophila melanogaster
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Arp87C-PA.

Description E-value Query
Range
Subject
Range
gi|109489498 - gi|109489498|ref|XP_001076100.1| PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus no...
525.0 [0..7] [376..312]

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Predicted Domain #1
Region A:
Residues: [1-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPYDVVVNQ PVVIDNGSGV IKAGFAGEHI PKCRFPNYIG RPKHVRVMAG ALEGDIFVGP  60
   61 KAEEHRGLLS IRYPMEHGIV TDWNDMERIW SYIYSKEQLA TFTEDHPVLL TEAPLNPRRN 120
  121 REKAAEFFFE GINAPALFVS MQAVLSLYAT GRVTGVVLDS GDGVTHAVPI YEGFAMPHSI 180
  181 MRVDIAGRDV TRYLKTLIRR EGFNFRSTAE FEIVRSIKEK VCYLATNPQK EETVETEKFA 240
  241 YKLPDGKIFE IGPARFRAPE VLFRPDLLGE ECEGIHDVLM YSIEKSDMDL RKMLYQNIVL 300
  301 SGGSTLFKGF GDRLLSELKK HSAKDLKIRI AAPQERLYST WMGGSILASL DTFKKMWISK 360
  361 REYEEEGQKA VHRKTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 1hluA
Description: Actin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle