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View Structure Prediction Details

Protein: CG6345-PA
Organism: Drosophila melanogaster
Length: 583 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6345-PA.

Description E-value Query
Range
Subject
Range
gi|10436223 - gi|10436223|dbj|BAB14760.1| unnamed protein product [Homo sapiens]
518.0 [0..3] [575..8]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISYRAFVR QVRHASTTAS KGATTSVTSS AAGQLKSEPA ARATFLERIQ RGPGFQDFFA  60
   61 VKPASRLKTD EEEHVDTSVP YLNSIDFNGN G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKVHFEVYGC QMNTNDTEVV FSILKENGYL RCQEPEEADV IMLVTCAVRD GAEQRIRNRL  60
   61 KHLRAMKNKR STRRHPLQLT LLGCMAERLK EKLLEQEQCV DVIAGPDSYK DLPRLLAISR 120
  121 HYGNSAINVL LSLDETYADV MPVRLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.49485
Match: PF00919.11
Description: No description for PF00919.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.974 N/A N/A c.23.1 CheY-like

Predicted Domain #3
Region A:
Residues: [238-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SESPTAFVSI MRGCDNMCTY CIVPFTRGRE RSRPLASIVA EVKALAEQGV KEVTLLGQNV  60
   61 NSYRDRTAQE EQDSLKATPV PGFSTVYKPK TGGTPFAALL RSVAQAVPDM RIRFTSPHPK 120
  121 DFSDEVLEVI RDHPNVCKQL HLPAQSGNTQ VLERMRRGYS REAYLELVQH IRQFLPNVGL 180
  181 SSDFICGFCG ETEEEFQDTV SLIQQVQYNV AYLFAYSMRE KTTAHRRYKD DVPINVKNER 240
  241 LQRMVQVFRE GATQLHRKME GQEQLILIEG KSKRSDAHWF GRNDANIKVI VPSIYVPISG 300
  301 DSTARKSFGV GDFLAVRIEE SNSQVLKGTP LELSNITDFH SRQLIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2qgqA
Description: No description for 2qgqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle