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View Structure Prediction Details

Protein: FBpp0305840, Art4-PA
Organism: Drosophila melanogaster
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305840, Art4-PA.

Description E-value Query
Range
Subject
Range
gi|28557603 - gi|28557603|gb|AAO45207.1| RE68504p [Drosophila melanogaster]
461.0 [0..1] [530..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLRPEEAR KLATAASVSP LSNCQFCGVV ISSIADEQKL EFTNKYKGSC TLLCSYDSQG  60
   61 VVLRVVSDDD RSHVLKEYMI AADTDAAQMG RRSYAVSLDA DNLVLRFASE QDQQLFRKVV 120
  121 ENVKHLRPKS VFSQRTEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 2as0A
Description: Crystal Structure of PH1915 (APC 5817): A Hypothetical RNA Methyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [139-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSASQYFQFY GYLSQQQNMM QDYVRTSTYQ RAILGNAVDF QDKIVLDVGA GSGILSFFAV  60
   61 QAGAAKVYAI EASNMAQYAQ QLVESNNVQH KISVIPGKIE EIELPEKVDV IISEPMGYML 120
  121 YNERMLETYL HARKWLKPQG KMYPTHGDLH IAPFSDESLY SEQYNKANFW YQSAFHGVDL 180
  181 TTLHKEGMKE YFRQPIVDTF DIRICMAKSV RHVCDFLNDK EDDLHLISIP LEFHILQTGI 240
  241 CHGLAFWFDV EFSGSSQNVW LSTSPTAPLT HWYQVRCLLP MPIFIKQGQT LTGRVLLEAN 300
  301 RRQSYDVTID LHIEGTLISS SNTLDLKNPY FRYTGAPVQA PPGTSTQSPS EQYWTQVDTQ 360
  361 GSRNSSSMLN GGISVNGIGE GMDITHGLMH PH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.522879
Match: 2v74B
Description: No description for 2v74B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle