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View Structure Prediction Details

Protein: SpdS-PB
Organism: Drosophila melanogaster
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SpdS-PB.

Description E-value Query
Range
Subject
Range
gi|26390475 - gi|26390475|dbj|BAC25903.1| unnamed protein product [Mus musculus]
196.0 [0..1] [217..82]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISFLPLCAH PNPKKVLIVG GGDGGVAREV VKHPLVEEVH QVEIDDRVVE LSKQYLPAMA  60
   61 CGFANEKLKL TIGDGFDYMK KHKNEFDVII TDSSDPIGPA VSLFQESYYE LMKHALKDDG 120
  121 IVCSQGGSFW LDLDYIKKTM SGCKEHFAKV AYAVTSVPSY PCGHIGFVMG SLNKNQDFAT 180
  181 PKLGKSEIDS IDLRYYSSEV HSAAFALPRW VQKHFYE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.30103
Match: 2o05A
Description: No description for 2o05A was found.

Predicted functions:

Term Confidence Notes
spermidine synthase activity 2.31131562815571 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.644010137949015 bayes_pls_golite062009
methyltransferase activity 0.635463629299812 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.181420092548185 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle