| Protein: | CG8007-PB |
| Organism: | Drosophila melanogaster |
| Length: | 778 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8007-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..431] | [768..113] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MKNRFFFSFT GYFPLGSEHC LTWICLDVLF CTASIMHLCT ISVDRYLSLR YPMRFGRNKT 60
61 RRRVTLKIVF VWLLSIAMSL PLSLMYSKNH ASVLVNGTCQ IPDPVYKLVG SIVCFYIPLG 120
121 VMLLTYCLTV RLLARQRQNL GGGQQTAAAT PGWASGWLGQ APALERRCTW RRLLKPGPGN 180
181 ASSVLHAHSA NSTDTDLSTL DNHELWLPDS SIKEPTPTTM TALHQFGAEM LKLSRGLESV 240
241 ASSSTTGS
|
| Detection Method: |  |
| Confidence: | 30.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [249-778] |
1 11 21 31 41 51
| | | | | |
1 PTKSEFSLSN HLQLQYPSSP QRYAATHQQS HHHNHQQHPA GVYHQQASPK GRHGTTVLGL 60
61 STTTLGIERE STRNSLASSR MGGEQSDGTL SQLSQRLRAY KKRRRASSAV PGREKRAGHE 120
121 DADEDVETPT STLRRHKRHN SLPKNALYPR HTTVQESLDD DDDEEEESAQ QKDQQTKSKI 180
181 CHSDTELDPP QKAKQCHIAG QNHQSDYLQL PSVCTCPYFG DRPLQNCVKS AEVKIISSAF 240
241 RVTTTTTAVS SSPSEMELLM CSSGNKKSLT SSVSAGITGG PAGAAPATVG STLSPHSAHN 300
301 QGSSLTVQSD GSGYLAAPGT PCPGRRKLSI SKTASVVTWD SSRHRRRGSS FGGVRTSLLL 360
361 TPTKTATTSN SSTPLRRSAT LRSHQNMNYQ GAGECGGKTR TTTSSPCMLQ RQQTVRSHHS 420
421 RNSSVISRNS SRHGRIIRLE QKATKVLGVV FFTFVILWSP FFVLNLLPTV CAECEERISH 480
481 WVFDVVTWLG YASSMVNPIF YTIFNKVFRQ AFKKVLLCRY SSTSAWRPSR
|
| Detection Method: | |
| Confidence: | 2.2 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
