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View Structure Prediction Details

Protein: Taf7-PA
Organism: Drosophila melanogaster
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Taf7-PA.

Description E-value Query
Range
Subject
Range
gi|3213201 - gi|3213201|gb|AAC39086.1| region with similarity to Homo sapiens TAFII55 encoded by Genbank Accessio...
420.0 [0..1] [474..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLAVPHLT PISNEHLVSS KEVVFFWKNR IEMFEKKSDK VKQAEHKARD DGVELESQFI  60
   61 MRVPKELADT VHEAINAGTI KDRLTIQLDP DLRYGEVRID DQILYTKLVD LPTVVESYKT 120
  121 IDNKSFYKSA DICQILICKE EREDETEKES PNKNKKKDPN KVDKKYLFPH GITPPCKNVR 180
  181 KRRFRKTLKK KNVEAPEIEK EVKH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 94.823909
Match: PF04658.4
Description: No description for PF04658.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [205-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLRIDNEAVR VDYEIINEED KPMDELEQSD IKPYNDADDD LQDESTMHAS EKTIMEMSSQ  60
   61 RHLQVESDDD EASNFPSHRA PNMGVAVHDI FGEEVSSTDD EDEPDRGNNT MQRRVMEESS 120
  121 RLSADDSRMS DFFGASGSNT GAGVVKMEQN VFSKSMFGHE ASSPKLSAAG SSSNLAAPSG 180
  181 FYDSQMLAKR EEFENMEFID EPQPQYTQQQ VQQKINQLTR QIRELKAQQV QKSTEIASIQ 240
  241 NATLKQRMQE TLDNLYTQVI ERELELKDFE NMLES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle