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View Structure Prediction Details

Protein: CG10055-PA
Organism: Drosophila melanogaster
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10055-PA.

Description E-value Query
Range
Subject
Range
gi|34193077 - gi|34193077|gb|AAH47879.1| SHQ1 homolog (S. cerevisiae) [Homo sapiens]
531.0 [0..66] [528..25]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGQIAHSY LENSCTLIIP RPPVLNQSSK SAQPAAAAAA SSSAGEEFGQ EAGSGLAEAE  60
   61 ALHVDRIRNC DIFVDAHDLY FYADVKLYKF HSRRTFDLRE LKTLLIKFNT TENHYQICLR 120
  121 CLPLTAGAQE GPGGERGGGG GTGDAAKQWN SRKEYIAAFL HLPTLSANLP DKQPLVQEWK 180
  181 LKRITDQCQL QLDDHERTYK LTNNFGYGYA SEYSGPLDLS ELDRATCRVS EPHRMSPIQR 240
  241 RQERVVDEMK RFSREQYKIN FVELQVPSGH QNPLRYKPKI YETSMTQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [288-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQAHLLHNIS RMQTREQQPC DVFRQNEIDC GLISILLAIC YDVRTTNNEP TCESGWTRSI  60
   61 LCPLYCYFEQ FDNYRDVLVA FLRRMITYPL YRNFELGRQC VRDAIEVLKG GRNWLINQLL 120
  121 LTHQQFASSD PSRDSFNNYY LEDYIRYVTS PSACSDEHMR LLARNLKNVL MDVNKQHLGL 180
  181 GVTEIETELI KELMQEMRID AGSQGSSPQQ QHGDDD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 121.102373
Match: PF04925.6
Description: No description for PF04925.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [504-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDLDNDTSGQ EDETTTDDES VITDSFYSVD MDMRLIENEI VYEDDEEDED DDEDGDDDED  60
   61 GDGDEDEDED EDEDDSSSST TTSSEAEGNS VIEQCSNSET AASTT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle