| Protein: | Pak-PC, Pak-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 704 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pak-PC, Pak-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
501.0 | [0..1] | [704..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MSSEEDKPPA PPVRLTSNRG GNERSGGGVG VGGGGLGGGG MGDVPPDMRP LPKEPDDSDR 60
61 KKKTLKSKIK GSKPSHTDSK PNISYPTNFE HTVHVGFDAV TGEFTGMPEA WARLLMNSNI 120
121 SKQEQKKNPQ AVLDVLKWFD NTTKQR
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1f3mA |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [147-275] |
1 11 21 31 41 51
| | | | | |
1 PSSKYMTNAI TTHSGSSLSR VSSSSPSSTP TDSELHGSNS GGNLIGVQLG SMTLGPNANN 60
61 VAVAGQILGN HYQQQQQHLL QQQQPLLHQN HNQHHMGISQ SHSYNFVGHT VSSSTSQHSS 120
121 ANEDDMLGP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-402] |
1 11 21 31 41 51
| | | | | |
1 QHPQQQPPPP PVASRPERTK SIYTRPIEDL QPAIIPMPVA PATTPATPLQ NHRTPGGISA 60
61 PAASPMMHNN ATTTLDKNKN NANLYTPEPT VAQVSAGGPS SQVAGNQIAV PQAAVAPAAT 120
121 PNTRAAN
|
| Detection Method: | |
| Confidence: | 1.09 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [403-704] |
1 11 21 31 41 51
| | | | | |
1 AKKKKMSDEE ILEKLRTIVS VGDPNRKYTK MEKIGQGASG TVYTAIESST GMEVAIKQMN 60
61 LSQQPKKELI INEILVMREN KHPNVVNYLD SYLVSEELWV VMEYLPGGSL TDVVTETCMD 120
121 EGQIAAVCRE VLQALEFLHA NQVIHRDIKS DNILLGLDGS VKLTDFGFCA QISPEQSKRT 180
181 TMVGTPYWMA PEVVTRKQYG PKVDLWSLGI MAIEMVEGEP PYLNENPLKA LYLIATNGKP 240
241 EIKEKDKLSS AFQDFLDQCL EVEVDRRASA LDLLKHPFLK LARPLASLTP LIMAAKEATK 300
301 GN
|
| Detection Method: | |
| Confidence: | 88.154902 |
| Match: | 1f3mC |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
