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View Structure Prediction Details

Protein: sec23-PA, FBpp03...
Organism: Drosophila melanogaster
Length: 773 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec23-PA, FBpp03....

Description E-value Query
Range
Subject
Range
gi|7271162 - gi|7271162|emb|CAB81549.1| putative Sec23 protein [Drosophila melanogaster]
1001.0 [0..1] [773..1]

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Predicted Domain #1
Region A:
Residues: [1-773]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTYEEFIQQ NEDRDGVRLT WNVWPSSRIE ASRLVVPLAC LYQPLKERPD LPPIQYEPVL  60
   61 CTRSNCRAIL NPLCQVDYRA KLWVCNFCFQ RNPFPPQYAA ISEQHQPAEL IPGFSTIEYT 120
  121 ITRAPTMPPV FIFLVDTCMD EEELDALKDS LQMSLSLLPT NALVGLITFG KMIQVHELGA 180
  181 EGCSKSYVFR GTKDLTAKQV QDMLGIGRGA APGPQQQQHL PGQPAGAAAP VPPAHRFLQP 240
  241 IGQCDAALGD LLSELQRDPW PVPQGKRYLR STGAALSIAV GLLECTYPNT GGRIMTFVGG 300
  301 PCSQGPGQVV DDELKHPIRS HHDIHKDNVR FMKKAIKHYD ALALRAATNG HSVDIYSCAL 360
  361 DQTGLLEMKQ LCNSTGGHMV MGDSFNSSLF KQTFQRVFAR DGRNDLKMAF NATLEVKCSR 420
  421 ELKISGGIGS CVSLNVKSPS VSDVEIGMGN TVQWKLCTLN PSSTVAYFFE VVNQHAAPIP 480
  481 QGGRGCIQFI TQYQHPSGQR RIRVTTLARN WADATSNVHH ISAGFDQEAA AVLMARMVVY 540
  541 RAETDEGPDI LRWVDRQLIR LCQKFGEYSK DDPNSFRLSQ NFSLFPQFMY HLRRSQFLQV 600
  601 FNNSPDETTF YRHMLMREDL TQSLIMIQPI LYSYSFNGPP EPVLLDTASI QADRILLMDT 660
  661 FFQILIYHGE TIAQWRALKY QDMPEYENFK QLLQAPVDDA QEILQTRFPM PRYIDTEHGG 720
  721 SQARFLLSKV NPSQTHNNMY AYGQDGGAPV LTDDVSLQLF MEHLKKLAVS TTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2nupA
Description: No description for 2nupA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle