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View Structure Prediction Details

Protein: exba-PG, exba-PA...
Organism: Drosophila melanogaster
Length: 422 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exba-PG, exba-PA....

Description E-value Query
Range
Subject
Range
gi|74005117 - gi|74005117|ref|XP_849107.1| PREDICTED: similar to basic leucine zipper and W2 domains 1 isoform 3 [...
443.0 [0..2] [407..35]

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Predicted Domain #1
Region A:
Residues: [1-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKTERPVL SGQRIKTRKR DEREKYDPTG FRDAVIAGLE KTEGDLEQIS KYLDSAGNKL  60
   61 DYRRYGEVLF DILIAGGLLV PGGSISQDGE KPRTSYCIFD APESMESMRN HEQVFVKLIR 120
  121 RYKYLEKMFE EEMGKVLLFV KGFTPSERIK LARMTALWLV NGSVPPNVLL VLNNEHLIKD 180
  181 GIALEFLLEL FQTFKQEKGI AYLIQALKKG GLESKLMDFF PPNKRTEEYF KQVFLDKELN 240
  241 EIVKLHKAQA SQEAKRELQQ ALIDDINDEK PYNEITSDIK DFSQRTNIPD HEIIVIIWST 300
  301 IMSLGEWNKK EELVTDQAVR HLKNYCPLLQ AFASTDRSEL ALILKVQEFC YENMNFMKAF 360
  361 QKIILLFYKT EVLSEEIILR WYKEGHSNKG KMHFLEQMRK FVEWLQSAEE ESESEDEQKN 420
  421 GE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 1ug3A
Description: C-terminal portion of human eIF4GI
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle