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View Structure Prediction Details

Protein: CG2926-PA
Organism: Drosophila melanogaster
Length: 2296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2926-PA.

Description E-value Query
Range
Subject
Range
gi|55380423, gi|... - gi|56307416|ref|NP_787974.3| dumpy CG33196-PB [Drosophila melanogaster], gi|55380423|gb|AAN10358.4| ...
364.0 [0..293] [2247..4527]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRDSDAVS DAGPRLSQQR GQRNRRIIMR IEFKDSEDSA SDQDRDDRPS CSAATRLRRS  60
   61 TRRQEVASHS DSDSVPRKST RKLRNRYGPR SDCSSSGSDI DQLPTRTRKR KKVESSDEEE 120
  121 PERTPNAVGR IQPMPADPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGFSSDISSN DLLEKCPICL LTFRQQEIGT PATCEHIFCA ACIDAWSRNV QTCPIDRIEF  60
   61 DRIIVRDSYA SRRVVREVRL D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2ep4A
Description: No description for 2ep4A was found.

Predicted Domain #3
Region A:
Residues: [221-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSKSNTELVV DDEADTAALS EEEVTNCEIC ESPDREDVML LCDSCNQGYH MDCLDPPLYE  60
   61 IPAGSWYCDN CIDSDDEDDN EQLELADDLD QLYEDIRGMG LPETRLRVRE VQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 2e6rA
Description: No description for 2e6rA was found.

Predicted Domain #4
Region A:
Residues: [334-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRILRTRQN ERIRAAVLRR TRSGATSAED STLTRTRTRT TTTTTTTTTT TRRTTTSTKK  60
   61 RPVQRRRRRR TRYRTYVVEY DLNNFDEKFA LKTSKKVIRR RRRRRRRGVA TAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [447-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGPGRRLSA SKRLAEQMGV KSEGFQSSHL SGGTASSFSL FGNANDLEYF SDSEPDAVSQ  60
   61 ISSAGLGSTA VQTSVRIGSI GAPRIRKALL QGKARIAAPP TAPTSAPAAD ILSSILDLQD 120
  121 RWHDASRNLG EVHIRADGTL NI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [589-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQRPAPTATE APLPKAGTSK TEKHLTQAPL YQQGGGGPNY NRGGGAGSSD SYNNRYSGNT  60
   61 SYRGGGGGGA GGSSGGSGVP SSSGEASSRH LTGEGDGQGG GGFGNQNFSS SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [701-841]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNNTNMSSF IPFHLRFNTP TRQQQPRQQN VLPANQPTPP FPGSAPPPAP VASSSNNFSG  60
   61 QTPMFAAPLN HHPAPVMGMP VVLSIPPPPM PPASLPWNSP LFKITPLQQA PAKSNDGNQN 120
  121 DDVDNCPNFS IYSQESQAVA N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [842-960]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASAMPSGVPH GPADASDKDD DDMNEDLVQL DDDDEDTDIP LPLGPEPEPV PEKVPKSSDD  60
   61 DLYEPENPTE EPEEPEMFEE SCDAVPTEKS ESSDHEPSNS NVQAAAPEEN DAEEARTRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [961-1071]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSPLVKEDR AADRDRAKGV LELYDDSDWE ELDIDKPKEF EKALLTETEA QVSPKRAPSK  60
   61 RPPSKKDTSL ERDVNESGSE HEQDRSYTPC LDEKNLAEEE EAGTTHQNNV S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1072-1204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSPKTRSSKV SGDEDEPEKA VGTDIQSEDE LNNENESPRR SRSRGTANNK KDKSKSRSKR  60
   61 NKGETFKKVG KRQKDRNYRG DKSEPDRSPR PDSRSLTPKM RSKSPRVSKS ISRSRSGSRS 120
  121 RCKSKSFSRS RSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1205-1382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSRSRNRRR RNSRSKSYSR SHSRSRSRSN SHSRQRFSFR GRDHQRGFFR GRGGLRLNYR  60
   61 NQQFHNRPFQ HYGQNYHQNQ NYHHQHNQHQ NYFPPNQHGQ HQQYFQRPKR RELPRYDVRN 120
  121 VVGTSRHQTQ AKDRYGRDAM RSHRSRSGRR NSRSFSRSVS RDSRVSLRSR SGSPKRRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1383-1485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSMSPTPPPG TSPPPHKHGR GRQTSTNRRY ARSPSPAPSP RNERATSPVQ SVHSRRSRSH  60
   61 TPNRINGDGN RSSLYMGSPH YTPRISRSRS RSRSKSPKDM HKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [1486-1647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKKSDKKKR RKRTGSSSPT TAARMRRISR QRDPFEDADD FLAPQRKRKK AGITTGQWSP  60
   61 SPSPGRCDFL HDSALQDKNS SWTPPLGTPK GGHYNNDGGL TPKKTKRKRD KSKKKRKQHQ 120
  121 LEKPRKEKKR KRRTQTPEPL PSKEVFASGN NILVSVSFNK ES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #14
Region A:
Residues: [1648-1764]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTNNASATLS SQQQSVVTIP PGREDLLSNR MTSMTSMASM ASNSNICSAV GAVKKTKRKR  60
   61 KKLEAKPVAI IDLERSPFQV HQEPADVIVL TDSEDATEPL SSRRERERDR DHELMRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #15
Region A:
Residues: [1765-1962]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGQREKTPQV GSLDAIMETS YENMTQSTGP KTPPEPPLVK FNLPTKKIQH KVRNNPLHED  60
   61 VDDINSADEL EASCSMAPAE QTPQHGHASH DGGQKIGPNT PPESGPCSPD AYDPFEPTKS 120
  121 PSLSPRSPTL TPSQNLDQQT VSMPASGAIG PGSGDKGESD GAHVTGSNAS TNTQAQGNAL 180
  181 NPVDLVMALM NKPNQSGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #16
Region A:
Residues: [1963-2172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQQESEVSSA QYISSSSLSL SLGVGSSTGG GGGGAGGGDN HDKTADGKTI TVLSNVLLTS  60
   61 SSVVSSSQHI PSISSPTPPS KKLTPLPKAG GSVASSSSGV GNIPTTSSGI GGTRNGSGLG 120
  121 NAGGSSNALD DSFSMEIESP YSPGSADYED LFEPPIPLEA SRRAKGGATG GKVEIFDNLF 180
  181 GSSSPISNIR MTSRYNTAVG KKSNRTKADR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #17
Region A:
Residues: [2173-2296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSKVKGARNP DFYDDVPNSA TDLQNKDRLL RKLNRQERVV EEVKLVLKPY FNKKAITKDD  60
   61 YKDIMRRAVP KICHSRSGEI NPHKIKNLID AYVRKFRAKH KKLSLLNTGQ VSSAVKCAAY 120
  121 LKKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle