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View Structure Prediction Details

Protein: CRMP-PA
Organism: Drosophila melanogaster
Length: 589 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRMP-PA.

Description E-value Query
Range
Subject
Range
gi|82407248 - gi|82407248|gb|ABB73022.1| dihydropyrimidinase mutant supA4 [Drosophila melanogaster]
460.0 [0..1] [589..1]

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Predicted Domain #1
Region A:
Residues: [1-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSPKPVKK VPIHLQSAQN RVYIKNGEIV NHDKSFKADV YIEDGIIKFV GPSSEITIPG  60
   61 GVRTIDASGL MIIPGGIDPH THMQLPFGGA VAVDDFYHGT KAAVAGGTTM IIDFVLPNKH 120
  121 ESMIEAYDKW RSWADPKVCC DYGLHVGITW WSKSVSEEIG ILCKELGVNS FKTFMAYKGL 180
  181 YQLNDSDLLD VFERIRHLNG VAMVHAENGD IIAKNTQRLL AEGINGPEGH ELSRPEEVEA 240
  241 EAVHRACVLA HQMKTPLFVS GLTSKSSAEL VGRARRSGYC VFGETLASSL GRSMSAVPKG 300
  301 DRIYAITSPP IRESAETPRQ LMKSLAYDDL QLTGSDNCTF NKEHKALGKG DFTKIPNGVN 360
  361 GVEDRMSLVW EKGVHAGLLD PCRFVAVTST NAAKIFNIYP QKGRIAVGSD ADIVIWNPNA 420
  421 TRTISKDTHH HACDFNIFEG MTVHGVCEFV LVRGRICAER GNVRVAEGFG RFIPTPVRPP 480
  481 FVYDIIEGKV QSQPEEQHEE KQNGSMAKRF AELDIQIPVQ EPISAMLAGN LAMPAEGSLC 540
  541 STPSVRGRVD GKRDLQESSF SISEELDRSG VRACIKVKNP PGGKSSGFW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 1kcxA
Description: X-ray structure of NYSGRC target T-45
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle