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View Structure Prediction Details

Protein: l(3)82Fd-PC
Organism: Drosophila melanogaster
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(3)82Fd-PC.

Description E-value Query
Range
Subject
Range
gi|114621287 - gi|114621287|ref|XP_001159245.1| PREDICTED: oxidation resistance 1 isoform 8 [Pan troglodytes]
273.0 [0..41] [266..612]
OXR1 - oxidation resistance 1
gi|123994755, gi... - gi|123994755|gb|ABM84979.1| oxidation resistance 1 [synthetic construct], gi|123979994|gb|ABM81826.1...
272.0 [0..41] [266..530]
gi|109087203 - gi|109087203|ref|XP_001087850.1| PREDICTED: similar to oxidation resistance 1 isoform 6 [Macaca mula...
272.0 [0..41] [266..611]
l(3)82Fd-PF - The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It i...
271.0 [0..54] [267..660]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFAISLFAI LAVCGLAGRR WGRYLYLHYG RHLLPRSLLS AKNRAPTPPL SPTKDDQSLE  60
   61 ALLDESGEMH ETVLSMSTDE YRKTSLFATG SFDLDFPIPD LIGKTEILTE EHREKLCSHL 120
  121 PARAEGYSWS LIFST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQHGFALNSL YRKMARLESP VLIVIEDTEH NVFGALTSCS LHVSDHFYGT GESLLYKFNP  60
   61 SFKVFHWTGE NMYFIKGNME SLSIGAGDGR FGLWLDGDLN QGRSQQCSTY GNEPLAPQED 120
  121 FVIKTLECWA FV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 76.69897
Match: PF07534.2
Description: No description for PF07534.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle