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View Structure Prediction Details

Protein: rpk-PA
Organism: Drosophila melanogaster
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rpk-PA.

Description E-value Query
Range
Subject
Range
gi|54639120, gi|... - gi|54639120|gb|EAL28522.1| GA10410-PA [Drosophila pseudoobscura], gi|125776741|ref|XP_001359376.1| G...
446.0 [0..1] [561..1]

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Predicted Domain #1
Region A:
Residues: [1-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISDSELDS SKGIDLTFRR RRKAGSVACE GFITTYHEYC RNTSIHGVQY LGEQERPFRE  60
   61 RIFWLFVFLI SIYGCSTLIQ SAYTKWTETP VIVSFAEKST PVWNIPFPAV TVCSETKRVL 120
  121 KQKGKETTYA DLYSQFSEDM RASRVFRPEN VSALEMEEFR TLLHVCNTQI IEEDIPLIAG 180
  181 DDLDYFDVLQ RMLPQFDRYF FYCRWLSRFG ECETFFRKTL TEEGICYTFN GLRATEIYRD 240
  241 DTYQYQHSGE PLEMENISSQ HTAWTLETGY ALDSDVETFP ARVLSAGARS GIFLALQSFK 300
  301 QEVDYACRGP VQGFKVLLHA PDDVPQVSKQ FVRIPMGKEV LIAVKPNMIT MSSGIAEYHP 360
  361 VRRQCFLSHE RSLRFFKVYT ESNCQLECLA NFTLTKCGCV KFSMPRNVDM PVCGEDKIHC 420
  421 YDRAERELLV REFKRVKALN AGRENSRSVE SACNCMPACT SLVYNTEISQ ANFDLEEMLV 480
  481 AEGDTEFLKE YPGSQMSRLS IYFKQSQFIT SKRSELYGMT EFLANCGGIF GLFMGFSILS 540
  541 LVEMIYHFTL RLFTNLKRLV KG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.69897
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle