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View Structure Prediction Details

Protein: FBpp0307410, FBp...
Organism: Drosophila melanogaster
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307410, FBp....

Description E-value Query
Range
Subject
Range
gi|54639340|gb|E... - GA16298-PA [Drosophila pseudoobscura], GA16298 [Drosophila pseudoobscura pseudoobscura]
gi|54639340, gi|... - gi|54639340|gb|EAL28742.1| GA16298 [Drosophila pseudoobscura pseudoobscura], gi|125777392|ref|XP_001...
320.0 [0..1] [354..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIILQEAQK WYRDLMDNKS DPRVNDFFLL SSPLPTLCMC IFYAYFSKSL GPRLMAKRKP  60
   61 MELRSVLVVY NAIQTIFSAW IFYEYLMSGW WGHYSLKCQP VDYSTTGLAM RMVNICWWYY 120
  121 ISKFTEFFDT LFFILRKKNE HVSTLHVIHH GCMPFSVWMG LKFAPGGHST FFALLNSFVH 180
  181 IVMYFYYMIA AMGPKYQKYI WWKKYLTTFQ MVQFVAIFTH QFQLLFRECD YPKGFMVWIG 240
  241 LHGVMFLFLF SDFYKAKYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAARRRRQAV KANGYANGSA SNGHSKHLGE GDALIANGCN TGACMPVMED EYVKSKGQSN  60
   61 GAYKEGFFKE GVLSNNDAIF NPDSSSSSLH QRKVK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.12
Match: 1qd7B
Description: 30S subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle