YRC Public Data Repository - Protein Structure Prediction

Protein:	CG6856-PA, FBpp0...
Organism:	Drosophila melanogaster
Length:	288 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6856-PA, FBpp0....

Description	E-value	Query Range	Subject Range
gi\|114605586 - gi\|114605586\|ref\|XP_001169936.1\| PREDICTED: dystrobrevin binding protein 1 isoform 1 [Pan troglodyte...	339.0	[0..60]	[287..25]
gi\|190690937, gi... - gi\|190690937\|gb\|ACE87243.1\| dystrobrevin binding protein 1 protein [synthetic construct], gi\|1906895... gi\|12052800 - gi\|12052800\|emb\|CAB66572.1\| hypothetical protein [Homo sapiens]	333.0	[0..77]	[287..39]
gi\|74004104 - gi\|74004104\|ref\|XP_852884.1\| PREDICTED: similar to dystrobrevin binding protein 1 isoform a [Canis f...	316.0	[0..92]	[287..140]
gi\|74198181 - gi\|74198181\|dbj\|BAE35265.1\| unnamed protein product [Mus musculus]	309.0	[0..78]	[287..123]
DTB1A_DANRE - Dysbindin-A OS=Danio rerio GN=dtnbp1a PE=2 SV=1	305.0	[0..79]	[287..41]
DTBP1_BOVIN - Dysbindin OS=Bos taurus GN=DTNBP1 PE=2 SV=1	304.0	[0..77]	[287..39]
gi\|48686575 - gi\|48686575\|gb\|AAT46043.1\| dystrobrevin binding protein 1 variant [Rattus norvegicus]	300.0	[0..78]	[287..28]

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Predicted Domain #1

Region A:
Residues: [1-288]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGNLKKKLS SAIQEGLVIS ENLQQQYRQR VSSGNSGSSQ ASGITTPISP LGLNESLSSS  60
   61 RSSSLSLSAP FQLTDGVPSH LNVAAGCSLL AKYEDDWQQI HGANEKNAEK AAQIANQISG 120
  121 IQDQASHQHR IMSELNSSLA GIPTLIAQLQ NSSQVLNSLE EMGKQLEIEL EKLEDLREEC 180
  181 ELQEFILEQQ FQLSRHKQKK LNELEQYRQQ IAQKHQSKIK DQEQTLLKLQ RERQAVFDDA 240
  241 FREDMEEYKQ RGQLTKIQTT SNKLALEEVV LEANEVETKD ALEQFLNG

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.76
Match:	2i1jA
Description:	No description for 2i1jA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits