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View Structure Prediction Details

Protein: Krn-PA
Organism: Drosophila melanogaster
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Krn-PA.

Description E-value Query
Range
Subject
Range
FAT2_RAT - Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
182.0 [0..20] [213..3943]
gi|114602953 - gi|114602953|ref|XP_001168406.1| PREDICTED: FAT tumor suppressor 2 [Pan troglodytes]
179.0 [0..20] [213..3941]
gi|82917251, gi|... - gi|94383392|ref|XP_901497.2| PREDICTED: fat tumor suppressor homolog isoform 7 [Mus musculus], gi|82...
179.0 [0..2] [195..4073]
gi|13787217 - gi|13787217|ref|NP_001438.1| FAT tumor suppressor 2 precursor [Homo sapiens]
178.0 [0..20] [213..3941]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAQDLLLLA TALIGAYLPL TAACSSRAIA KPRPTAAPIL PPDNVEISTT PRPNVTFPIF  60
   61 ACPPTYVAWY CLNDGTCFTV KIHNEILYNC ECALGFMGPR CEYKEIDGSY LPTRNRVMLE 120
  121 KASIVSGATL ALLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2gy5A
Description: No description for 2gy5A was found.

Predicted Domain #2
Region A:
Residues: [135-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMCCVVLYL RHEKLQKQKL HDSTTTTTTD GGCQNEGMDE VDGLRPLRPV RRPFGPCRIL  60
   61 SLEEAHLQAK ASNRPRHCNE LLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle