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View Structure Prediction Details

Protein: CG13465-PA
Organism: Drosophila melanogaster
Length: 78 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13465-PA.

Description E-value Query
Range
Subject
Range
BobA-PA - The gene Brother of Bearded A is referred to in FlyBase by the symbol Dmel\BobA (CG12487, FBgn004048...
gi|220951650 - gi|220951650|gb|ACL88368.1| BobA-PA [synthetic construct]
114.0 [0..1] [78..1]
gi|33329017 - gi|33329017|gb|AAQ09915.1| CG12487 [Drosophila yakuba]
101.0 [0..1] [78..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAETALVSN FNGVTEKKSL TGASTNLKKL LKTIKKVFKN SKPSKEIPIP NIIYSCNTEE  60
   61 EHQNWLNEKL EAMAIHLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.830 a.24.17 Group V grass pollen allergen
View Download 0.830 a.24.17 Group V grass pollen allergen
View Download 0.755 a.7.16 Description not found.
View Download 0.574 a.42.1 MDM2
View Download 0.569 a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
View Download 0.564 a.7.14 Description not found.
View Download 0.560 a.47.2 t-snare proteins
View Download 0.541 a.7.6 Ribosomal protein S20
View Download 0.453 a.51.1 Cytochrome c oxidase subunit h


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