YRC Public Data Repository - Protein Structure Prediction

Protein:	Eaf6-PA
Organism:	Drosophila melanogaster
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eaf6-PA.

Description	E-value	Query Range	Subject Range
gi\|125979413, gi... - gi\|54640722\|gb\|EAL29473.1\| GA11793 [Drosophila pseudoobscura pseudoobscura], gi\|125979413\|ref\|XP_001... gi\|125979413\|ref... - GA11793-PA [Drosophila pseudoobscura], GA11793 [Drosophila pseudoobscura pseudoobscura]	200.0	[0..1]	[225..1]
EAF6_CANAL - Chromatin modification-related protein EAF6 OS=Candida albicans GN=EAF6 PE=3 SV=1 EAF6_CANAL - Chromatin modification-related protein EAF6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=E...	158.0	[0..7]	[176..40]
gi\|67524955, gi\|... - gi\|67524955\|ref\|XP_660539.1\| hypothetical protein AN2935.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	154.0	[0..2]	[167..51]
gi\|110759085 - gi\|110759085\|ref\|XP_001120359.1\| PREDICTED: similar to Eaf6 CG12756-PA [Apis mellifera]	133.0	[0..27]	[120..2]
gi\|109477213 - gi\|109477213\|ref\|XP_001057055.1\| PREDICTED: similar to Eaf6 CG12756-PA [Rattus norvegicus]	132.0	[0..33]	[120..45]
gi\|91093689 - gi\|91093689\|ref\|XP_970213.1\| PREDICTED: similar to CG12756-PA [Tribolium castaneum]	131.0	[0..31]	[121..8]
gi\|70888315 - gi\|70888315\|gb\|AAZ13760.1\| sarcoma antigen NY-SAR-91 [Homo sapiens]	130.0	[0..17]	[147..4]
gi\|109002108 - gi\|109002108\|ref\|XP_001111537.1\| PREDICTED: similar to Eaf6 CG12756-PA isoform 1 [Macaca mulatta]	129.0	[0..33]	[147..14]
gi\|12843811, gi\|... - gi\|21312536\|ref\|NP_081586.1\| hypothetical protein LOC70088 [Mus musculus], gi\|148698378\|gb\|EDL30325.... IPI:IPI00359017.... - Tax_Id=10116 PREDICTED: similar to sarcoma antigen NY-SAR-91, Uncharacterized protein OS=Rattus norv...	128.0	[0..33]	[120..14]
gi\|118778886, gi... - gi\|118778886\|ref\|XP_308936.3\| ENSANGP00000013269 [Anopheles gambiae str. PEST], gi\|116132596\|gb\|EAA0...	128.0	[0..28]	[225..5]

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Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPTSKNVS ETNGNKPKKS AKTSSNTKGG SMDTRAELAD LIKKKAETSE QLANLERQIY  60
   61 AFEGSYLEDT QLCGNIIRGW ERYLTSNKAT NSKADKRNRK FKEAERLFSK SSITSMAICN 120
  121 PERASESDSI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	43.080922
Match:	PF09340.1
Description:	No description for PF09340.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [131-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNEDSSDNQI SINQNTTTAH DGTTTIKSTP KDEKDSPSHR NEGSVVSGMV SGSTNSGGNK  60
   61 DLLGTPTSNT KSKLSTNSSA TAKKSGHINK KIRHR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits