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View Structure Prediction Details

Protein: LysS-PA
Organism: Drosophila melanogaster
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LysS-PA.

Description E-value Query
Range		 Subject
Range
LYSC_ERYPA - Lysozyme C OS=Erythrocebus patas GN=LYZ PE=3 SV=1
LYSC_CHLAE - Lysozyme C OS=Chlorocebus aethiops GN=LYZ PE=2 SV=1
 201.0 [0..1] [135..1]
LYSC_MACMU - Lysozyme C OS=Macaca mulatta GN=LYZ PE=2 SV=1
 199.0 [0..1] [135..1]
LysP-PA - The gene Lysozyme P is referred to in FlyBase by the symbol Dmel\LysP (CG9116, FBgn0004429). It is a...
 199.0 [0..1] [140..1]
LYSC_PAPAN - Lysozyme C OS=Papio anubis GN=LYZ PE=1 SV=1
LYSC_CERAT - Lysozyme C OS=Cercocebus atys GN=LYZ PE=2 SV=1
 198.0 [0..1] [135..1]
LYSC_PONPY - Lysozyme C OS=Pongo pygmaeus GN=LYZ PE=2 SV=1
 198.0 [0..1] [133..1]
LYSC_ALLNI - Lysozyme C OS=Allenopithecus nigroviridis GN=LYZ PE=3 SV=1
 198.0 [0..1] [135..1]
LYSC_COLAN - Lysozyme C OS=Colobus angolensis GN=LYZ PE=3 SV=1
LYSC_COLGU - Lysozyme C OS=Colobus guereza GN=LYZ PE=2 SV=1
 197.0 [0..1] [139..1]
gi|123982912, gi... - gi|123997593|gb|ABM86398.1| lysozyme (renal amyloidosis) [synthetic construct], gi|123982912|gb|ABM8...
LYZ - lysozyme
LYSC_PANPA - Lysozyme C OS=Pan paniscus GN=LYZ PE=3 SV=1
LYSC_PANTR - Lysozyme C OS=Pan troglodytes GN=LYZ PE=2 SV=1
 197.0 [0..1] [133..1]
LYSC_HYLLA - Lysozyme C OS=Hylobates lar GN=LYZ PE=2 SV=1
 197.0 [0..1] [139..1]

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Predicted Domain #1
Region A:
Residues: [1-140] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAFFALVLL AIAAPALAGR TLDRCSLARE MADLGVPRDQ LDKWTCIAQH ESDYRTWVVG  60
   61 PANSDGSNDY GIFQINDLYW CQADGRFSYN ECGLSCNALL TDDITNSVRC AQKVLSQQGW 120
  121 SAWAVWHYCS GWLPSIDECF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 2fbdA
Description: No description for 2fbdA was found.
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Created and Maintained by: Michael Riffle