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View Structure Prediction Details

Protein: CG3829-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3829-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|54635447, gi|... - gi|54635447|gb|EAL24850.1| GA17715 [Drosophila pseudoobscura pseudoobscura], gi|125807124|ref|XP_001...
gi|195149487, gi... - gi|195149487|ref|XP_002015689.1| GL11204 [Drosophila persimilis], gi|194109536|gb|EDW31579.1| GL1120...
gi|54635447|gb|E... - GA17715-PA [Drosophila pseudoobscura], GA17715 [Drosophila pseudoobscura pseudoobscura]
629.0 [0..1] [584..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHTKDAEMS MPARQESDRT SAPSVTKSLT LNSTRSGVGT GNFGGYGMTN GAEKPSVLHM  60
   61 IMEALGLRNQ AQNRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTSKDIGTLI MLGVMFLLFV ISVTGFFVMW FTEYYNNTIL ENLILAENSD TANSWLNPDP  60
   61 KYDTLLKAHI FHYPNIDDYL AGRADKIKVV DVGPLTYQEH TVKDEVSFNK NFTVSFR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRKSYKFLPE KSSIGEHEVV RVPNVPLISA AGPVKRMKAF ERLAVSTWIK QFKEPLFKNL  60
   61 TVSEYLWGYE DSIIKLKSLG RGRRRFGLLM SRNGTSVDSV QLNTGEDDIT KFSIITQFNG 120
  121 MPQLDYWEGD ECNRIDGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [331-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPSMFSPHLL QDRSTVNVFL QVLCRKVPLH FEKEVTIYND IDVLRYRTPM DVFSHPSKNP  60
   61 ANQCYCQNTE LCLPSGVINA TKCYGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [417-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APIFPSFPHF FTGDPVLYQD FEGIEPDAAV HQTYADIHPR FGFPISGASR VQINIMLDKT  60
   61 PILRNQGDRL KNTTILPLMW IEITSGDFSE EVLHTLYLST FGLNAIQQTL KYGTLLISVT 120
  121 SFSLIVAGVY YLNSRREQQL QESKTSAELE ALNGGENVIV VHHIDMPVPL PVQDGGIHQG 180
  181 T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle